STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gdhAGlutamate dehydrogenase; ORF_ID:gll1133; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. (458 aa)    
Predicted Functional Partners:
glsF
Ferredoxin-dependent glutamate synthase; ORF_ID:glr1508.
  
 0.999
glnA
Glutamate--ammonia ligase; ORF_ID:glr1052.
  
 
 0.962
gll3998
ORF_ID:gll3998; probable isocitrate dehydrogenase; Belongs to the isocitrate and isopropylmalate dehydrogenases family.
   
 0.960
putA
1-pyrroline-5-carboxylate dehydrogenase; ORF_ID:glr2755; Belongs to the aldehyde dehydrogenase family.
  
 0.958
argD
N-acetylornithine aminotransferase; ORF_ID:glr0547; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. ArgD subfamily.
  
  
 0.933
argJ
Arginine biosynthesis bifunctional protein; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of N-acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate. Belongs to the ArgJ family.
     
 0.923
gll2499
Glutamine synthetase III; ORF_ID:gll2499; Belongs to the glutamine synthetase family.
  
 
 0.919
nirA
Ferredoxin nitrite reductase; ORF_ID:gll1557; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
     
 0.916
glr2600
Aspartate aminotransferase; ORF_ID:glr2600.
  
 
 0.915
purQ
Phosphoribosylformyl glycinamidine synthetase; Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP- dependent manner. PurS interacts with PurQ and PurL and is thought to assist [...]
    
  0.906
Your Current Organism:
Gloeobacter violaceus
NCBI taxonomy Id: 251221
Other names: G. violaceus PCC 7421, Gloeobacter violaceus ATCC 29082, Gloeobacter violaceus PCC 7421, Gloeobacter violaceus str. PCC 7421, Gloeobacter violaceus strain PCC 7421
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