STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
glr1208ORF_ID:glr1208; hypothetical protein. (230 aa)    
Predicted Functional Partners:
glr0871
ORF_ID:glr0871; hypothetical protein.
  
     0.500
glr1209
ORF_ID:glr1209; unknown protein.
       0.498
glr1207
ORF_ID:glr1207; hypothetical protein.
       0.497
gll1561
ORF_ID:gll1561; hypothetical protein.
  
     0.497
glr3813
ORF_ID:glr3813; hypothetical protein.
  
     0.496
gll2581
ORF_ID:gll2581; hypothetical protein.
  
     0.487
glr1098
ORF_ID:glr1098; hypothetical protein.
  
     0.485
gll2958
ORF_ID:gll2958; hypothetical protein.
  
     0.460
glr3975
ORF_ID:glr3975; hypothetical protein.
  
     0.453
glr0136
ORF_ID:glr0136; hypothetical protein.
  
     0.437
Your Current Organism:
Gloeobacter violaceus
NCBI taxonomy Id: 251221
Other names: G. violaceus PCC 7421, Gloeobacter violaceus ATCC 29082, Gloeobacter violaceus PCC 7421, Gloeobacter violaceus str. PCC 7421, Gloeobacter violaceus strain PCC 7421
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.