STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gll1302ORF_ID:gll1302; unknown protein. (494 aa)    
Predicted Functional Partners:
glr3104
ORF_ID:glr3104; probable ABC transporter ATP-binding protein.
 
 
 0.871
gll1303
ORF_ID:gll1303; hypothetical protein.
 
    
0.842
glr0404
ORF_ID:glr0404; hypothetical protein.
  
 
 0.718
glr1304
ORF_ID:glr1304; unknown protein.
       0.501
glr0436
ABC transporter ATP-binding protein; ORF_ID:glr0436.
  
 
 0.454
gll0675
Gll0675 protein; ABC transporter ATP-binding protein NodI homolog; ORF_ID:gll0675.
  
 
 0.454
glr2015
ABC transporter ATP-binding component; ORF_ID:glr2015.
  
 
 0.454
glr2167
ABC transporter ATP-binding protein; ORF_ID:glr2167.
  
 
 0.454
glr3421
ORF_ID:glr3421; probable ABC transporter ATP-binding protein.
  
 
 0.454
glr3472
ORF_ID:glr3472; probable ABC transporter ATP-binding protein.
  
 
 0.454
Your Current Organism:
Gloeobacter violaceus
NCBI taxonomy Id: 251221
Other names: G. violaceus PCC 7421, Gloeobacter violaceus ATCC 29082, Gloeobacter violaceus PCC 7421, Gloeobacter violaceus str. PCC 7421, Gloeobacter violaceus strain PCC 7421
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.