Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
gll1611 | gll1612 | gene:10759101 | gene:10759102 | ORF_ID:gll1611; putative transposase. | ORF_ID:gll1612; putative transposase. | 0.707 |
gll1611 | gsl1613 | gene:10759101 | gene:10759103 | ORF_ID:gll1611; putative transposase. | ORF_ID:gsl1613; unknown protein. | 0.496 |
gll1612 | gll1611 | gene:10759102 | gene:10759101 | ORF_ID:gll1612; putative transposase. | ORF_ID:gll1611; putative transposase. | 0.707 |
gll1612 | gsl1613 | gene:10759102 | gene:10759103 | ORF_ID:gll1612; putative transposase. | ORF_ID:gsl1613; unknown protein. | 0.565 |
glr1614 | gsl1613 | gene:10759104 | gene:10759103 | Chromophore lyase CpcS/CpeS; Covalently attaches a chromophore to Cys residue(s) of phycobiliproteins. | ORF_ID:gsl1613; unknown protein. | 0.526 |
gsl1613 | gll1611 | gene:10759103 | gene:10759101 | ORF_ID:gsl1613; unknown protein. | ORF_ID:gll1611; putative transposase. | 0.496 |
gsl1613 | gll1612 | gene:10759103 | gene:10759102 | ORF_ID:gsl1613; unknown protein. | ORF_ID:gll1612; putative transposase. | 0.565 |
gsl1613 | glr1614 | gene:10759103 | gene:10759104 | ORF_ID:gsl1613; unknown protein. | Chromophore lyase CpcS/CpeS; Covalently attaches a chromophore to Cys residue(s) of phycobiliproteins. | 0.526 |