STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ycf46Ycf46 protein; ORF_ID:glr1649; hypothetical protein. (502 aa)    
Predicted Functional Partners:
glr1650
ORF_ID:glr1650; hypothetical protein.
       0.752
ycf35
Ycf35 protein; ORF_ID:gll2881; hypothetical protein.
 
   
 0.722
ycf35-2
Ycf35 protein; ORF_ID:gll3805; hypothetical protein.
 
   
 0.692
glr1648
ORF_ID:glr1648; hypothetical protein.
       0.586
dnaK
DnaK-type molecular chaperone; ORF_ID:gll1676; Belongs to the heat shock protein 70 family.
 
 0.582
dnaN
DNA polymerase III beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...]
  
 
 0.534
glpK
Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family.
   
  0.469
glr4290
ORF_ID:glr4290; hypothetical protein.
 
   
 0.465
htpG
Heat shock protein; Molecular chaperone. Has ATPase activity.
   
 0.434
gll3802
DnaK like protein; ORF_ID:gll3802; Belongs to the heat shock protein 70 family.
 
 0.403
Your Current Organism:
Gloeobacter violaceus
NCBI taxonomy Id: 251221
Other names: G. violaceus PCC 7421, Gloeobacter violaceus ATCC 29082, Gloeobacter violaceus PCC 7421, Gloeobacter violaceus str. PCC 7421, Gloeobacter violaceus strain PCC 7421
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.