STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pysPhytoene synthase; ORF_ID:glr1744. (317 aa)    
Predicted Functional Partners:
pds
Phytoene dehydrogenase; ORF_ID:glr0867.
 
 0.999
crtE
Geranylgeranyl pyrophosphate synthase; ORF_ID:gll0416; Belongs to the FPP/GGPP synthase family.
  
 0.989
crtH
CrtH protein; ORF_ID:gll2133; unknown protein.
  
 0.983
chlP
Geranylgeranyl hydrogenase; ORF_ID:glr4377.
 
 
 0.907
sds
Solanesyl diphosphate synthase; ORF_ID:gll0753; Belongs to the FPP/GGPP synthase family.
  
 0.895
gll2874
ORF_ID:gll2874; hypothetical protein.
 
  
 0.890
gll0108
Undecaprenyl pyrophosphate synthetase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids.
   
 
 0.829
crtO
Beta-carotene ketolase; ORF_ID:gll0394.
 
  
 0.781
glr1745
ORF_ID:glr1745; unknown protein.
     
 0.774
gll3710
ORF_ID:gll3710; unknown protein.
  
 
 0.748
Your Current Organism:
Gloeobacter violaceus
NCBI taxonomy Id: 251221
Other names: G. violaceus PCC 7421, Gloeobacter violaceus ATCC 29082, Gloeobacter violaceus PCC 7421, Gloeobacter violaceus str. PCC 7421, Gloeobacter violaceus strain PCC 7421
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.