STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gll2005ORF_ID:gll2005; probable oxidoreductase. (290 aa)    
Predicted Functional Partners:
gll2007
ORF_ID:gll2007; hypothetical protein.
       0.621
gll2006
ORF_ID:gll2006; hypothetical protein.
       0.618
gll4226
ORF_ID:gll4226; probable modular polyketide synthase.
  
 
 0.521
gll2145
Malonyl coenzyme A-acyl carrier protein transacylase; ORF_ID:gll2145.
 
 
 0.441
glr2008
ORF_ID:glr2008; putative transposase.
       0.429
gll1941
ORF_ID:gll1941; similar to polyketide synthase.
  
 
 0.409
Your Current Organism:
Gloeobacter violaceus
NCBI taxonomy Id: 251221
Other names: G. violaceus PCC 7421, Gloeobacter violaceus ATCC 29082, Gloeobacter violaceus PCC 7421, Gloeobacter violaceus str. PCC 7421, Gloeobacter violaceus strain PCC 7421
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.