STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ccmK-2CcmK protein. (102 aa)    
Predicted Functional Partners:
ccmL
Carbon dioxide concentrating mechanism protein; ORF_ID:gll2094.
 
 
 
 0.997
ccmM
Carbon dioxide concentrating mechanism protein; ORF_ID:gll2093.
   
 
 0.940
glr1519
ORF_ID:glr1519; hypothetical protein.
 
 
 
 0.880
rbcS
Ribulose 1,5-bisphosphate carboxylase/oxygenase small subunit; ORF_ID:glr2158; bifunctional.
   
 
 0.837
rbcL
Ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit; RuBisCO catalyzes two reactions: the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate in the photorespiration process. Both reactions occur simultaneously and in competition at the same active site.
     
 0.814
rbcX
RbcX protein; ORF_ID:glr2157; hypothetical protein.
      
 0.799
ccmK
CcmK protein; ORF_ID:gll2095; carbon dioxide concentrating mechanism protein CcmK homolog.
 
 
  
0.752
ccmN
Carbon dioxide concentrating mechanism protein; ORF_ID:gll2092.
   
 
 0.708
ccmO
Carbon dioxide concentrating mechanism protein; ORF_ID:gll2091.
 
   
0.657
hisH
Amidotransferase; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the synthesis of IGP and AICAR. The resulting ammonia molecule is channeled to the active site of HisF.
      
 0.579
Your Current Organism:
Gloeobacter violaceus
NCBI taxonomy Id: 251221
Other names: G. violaceus PCC 7421, Gloeobacter violaceus ATCC 29082, Gloeobacter violaceus PCC 7421, Gloeobacter violaceus str. PCC 7421, Gloeobacter violaceus strain PCC 7421
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.