STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gll2146ORF_ID:gll2146; hypothetical protein. (450 aa)    
Predicted Functional Partners:
gll2885
ORF_ID:gll2885; hypothetical protein.
 
     0.923
gll2099
ORF_ID:gll2099; probable phytase.
 
   
 0.860
gll0863
ORF_ID:gll0863; hypothetical protein.
  
     0.626
gll2145
Malonyl coenzyme A-acyl carrier protein transacylase; ORF_ID:gll2145.
       0.588
glr2147
ORF_ID:glr2147; unknown protein.
       0.572
gll3873
ORF_ID:gll3873; hypothetical protein.
 
      0.546
gll2144
ORF_ID:gll2144; hypothetical protein.
       0.529
gll2143
ORF_ID:gll2143; hypothetical protein.
       0.520
glr0500
ORF_ID:glr0500; hypothetical protein.
      0.408
Your Current Organism:
Gloeobacter violaceus
NCBI taxonomy Id: 251221
Other names: G. violaceus PCC 7421, Gloeobacter violaceus ATCC 29082, Gloeobacter violaceus PCC 7421, Gloeobacter violaceus str. PCC 7421, Gloeobacter violaceus strain PCC 7421
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.