STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gll2180UDP-glucose dehydrogenase; ORF_ID:gll2180. (462 aa)    
Predicted Functional Partners:
rfbB-2
dTDP-glucose 4-6-dehydratase; ORF_ID:gll2179.
 
 0.987
rfbB-4
dTDP-glucose 4-6-dehydratase; ORF_ID:gll3773.
 
 0.957
glr1068
Nucleotide sugar epimerase; ORF_ID:glr1068.
 
 0.930
glr2820
UDP-glucose 4-epimerase; ORF_ID:glr2820; Belongs to the NAD(P)-dependent epimerase/dehydratase family.
  
 
 0.915
gll2182
ORF_ID:gll2182; hypothetical protein.
     
 0.673
rfbB
dTDP-glucose 4-6-dehydratase; ORF_ID:glr0468; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
  
  
 0.634
rfbB-3
dTDP-glucose 4-6-dehydratase; ORF_ID:glr3235; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
 
  
 0.634
gll2183
ORF_ID:gll2183; similar to mannose-1-phosphate guanyltransferase.
  
  
 0.628
rfbC-2
dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family.
  
  
 0.623
gll2185
ORF_ID:gll2185; probable glucose-1-phosphate cytidylyltransferase.
  
  
 0.605
Your Current Organism:
Gloeobacter violaceus
NCBI taxonomy Id: 251221
Other names: G. violaceus PCC 7421, Gloeobacter violaceus ATCC 29082, Gloeobacter violaceus PCC 7421, Gloeobacter violaceus str. PCC 7421, Gloeobacter violaceus strain PCC 7421
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