STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gll2196HlyB/MsbA family ABC transporter; ORF_ID:gll2196. (607 aa)    
Predicted Functional Partners:
gll2195
ORF_ID:gll2195; probable glycosyl transferase.
  
   0.731
glr2000
ATP-binding protein of ABC transporter; Non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the inner membrane, and an ATP- binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides.
     
0.727
gll2197
ORF_ID:gll2197; probable glycosyl transferase.
  
   0.702
gll2199
ORF_ID:gll2199; hypothetical protein.
       0.695
gll2198
ORF_ID:gll2198; unknown protein.
       0.693
gll2200
Mannose-1-phosphate guanyltransferase; ORF_ID:gll2200.
       0.693
gll2194
ORF_ID:gll2194; probable glycosyl transferase.
  
   0.674
gll0021
HlyB/MsbA family ABC transporter; ORF_ID:gll0021.
 
 
  
0.667
dnaK-2
Molecular chaperone; Acts as a chaperone; Belongs to the heat shock protein 70 family.
  
 0.659
gll1404
ABC transporter ATP-binding protein; ORF_ID:gll1404; Belongs to the ABC transporter superfamily.
 
     
0.599
Your Current Organism:
Gloeobacter violaceus
NCBI taxonomy Id: 251221
Other names: G. violaceus PCC 7421, Gloeobacter violaceus ATCC 29082, Gloeobacter violaceus PCC 7421, Gloeobacter violaceus str. PCC 7421, Gloeobacter violaceus strain PCC 7421
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.