STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gll2226ORF_ID:gll2226; hypothetical protein. (1009 aa)    
Predicted Functional Partners:
gll2225
ORF_ID:gll2225; unknown protein.
       0.773
gll1408
WD repeat protein; ORF_ID:gll1408.
 
 
  0.575
htpG
Heat shock protein; Molecular chaperone. Has ATPase activity.
  
 0.552
gll4092
ORF_ID:gll4092; similar to kinesin light chain.
  
  
 
0.546
glr4093
ORF_ID:glr4093; similar to kinesin light chain.
 
  
 
0.517
glr0906
WD-repeat protein; ORF_ID:glr0906.
 
  0.504
glr2821
WD-repeat protein; ORF_ID:glr2821.
 
 0.496
glr1175
WD-repeat protein; ORF_ID:glr1175.
 
  0.479
gll2888
WD-repeat protein; ORF_ID:gll2888.
 
  0.477
glr1965
WD-repeat protein; ORF_ID:glr1965.
 
  0.471
Your Current Organism:
Gloeobacter violaceus
NCBI taxonomy Id: 251221
Other names: G. violaceus PCC 7421, Gloeobacter violaceus ATCC 29082, Gloeobacter violaceus PCC 7421, Gloeobacter violaceus str. PCC 7421, Gloeobacter violaceus strain PCC 7421
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.