STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gll2828ORF_ID:gll2828; unknown protein. (223 aa)    
Predicted Functional Partners:
gll2827
ORF_ID:gll2827; probable monooxygenase.
     
 0.709
gll2826
ORF_ID:gll2826; unknown protein.
       0.697
gll2829
ORF_ID:gll2829; similar to polyketide synthase.
       0.664
gll2830
ORF_ID:gll2830; similar to polyketide synthase.
       0.664
gll2831
ORF_ID:gll2831; hypothetical protein.
       0.664
gll2825
Quinone oxidoreductase; ORF_ID:gll2825.
       0.567
gll2832
ORF_ID:gll2832; hypothetical protein.
       0.544
gll2833
ORF_ID:gll2833; probable oxidoreductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
       0.537
gll2824
Cholesterol oxidase; ORF_ID:gll2824.
       0.500
gll2834
Alpha-acetolactate decarboxylase; ORF_ID:gll2834; Belongs to the alpha-acetolactate decarboxylase family.
       0.444
Your Current Organism:
Gloeobacter violaceus
NCBI taxonomy Id: 251221
Other names: G. violaceus PCC 7421, Gloeobacter violaceus ATCC 29082, Gloeobacter violaceus PCC 7421, Gloeobacter violaceus str. PCC 7421, Gloeobacter violaceus strain PCC 7421
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.