STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gll2829ORF_ID:gll2829; similar to polyketide synthase. (1199 aa)    
Predicted Functional Partners:
gll1948
ORF_ID:gll1948; probable acyl-CoA synthase.
 
 0.969
gll1953
ORF_ID:gll1953; probable acyl-CoA synthase.
 
 0.969
glr2850
ORF_ID:glr2850; probable thioesterase.
  
 0.969
gll1934
ORF_ID:gll1934; probable thioesterase.
  
 0.957
gll2825
Quinone oxidoreductase; ORF_ID:gll2825.
 
 
 0.957
glr2849
ORF_ID:glr2849; hypothetical protein.
 
 
   0.944
glr2859
ORF_ID:glr2859; probable oxidoreductase.
 
 
 
 0.919
gll2830
ORF_ID:gll2830; similar to polyketide synthase.
 
     0.915
glr1146
ORF_ID:glr1146; probable long-chain fatty-acid-CoA ligase.
 
 
 0.913
glr1122
ORF_ID:glr1122; probable long chain fatty acid CoA ligase.
 
 
 0.909
Your Current Organism:
Gloeobacter violaceus
NCBI taxonomy Id: 251221
Other names: G. violaceus PCC 7421, Gloeobacter violaceus ATCC 29082, Gloeobacter violaceus PCC 7421, Gloeobacter violaceus str. PCC 7421, Gloeobacter violaceus strain PCC 7421
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.