STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
glcEGlycolate oxidase subunit; ORF_ID:glr3071. (435 aa)    
Predicted Functional Partners:
glcF
Glycolate oxidase iron-sulfur subunit; ORF_ID:glr3072.
 
 0.996
glcD
Glycolate oxidase subunit; ORF_ID:glr3069.
  
  
 
0.928
gll4271
KHG-KDPG bifunctional aldolase; ORF_ID:gll4271.
   
 
 0.914
gll0254
ORF_ID:gll0254; probable hydrolase.
    
 0.904
gll3363
Electron transfer flavoprotein, alpha subunit; ORF_ID:gll3363.
 
 
 0.809
gll3364
Electron transfer flavoprotein, beta subunit; ORF_ID:gll3364.
 
 
 0.801
glr1603
IMP dehydrogenase; ORF_ID:glr1603.
  
 
 0.647
glsF
Ferredoxin-dependent glutamate synthase; ORF_ID:glr1508.
     
 0.486
atpB
ATP synthase beta subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits; Belongs to the ATPase alpha/beta chains family.
     
 0.441
gll4226
ORF_ID:gll4226; probable modular polyketide synthase.
  
 
 0.439
Your Current Organism:
Gloeobacter violaceus
NCBI taxonomy Id: 251221
Other names: G. violaceus PCC 7421, Gloeobacter violaceus ATCC 29082, Gloeobacter violaceus PCC 7421, Gloeobacter violaceus str. PCC 7421, Gloeobacter violaceus strain PCC 7421
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.