STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gll3126ORF_ID:gll3126; unknown protein. (488 aa)    
Predicted Functional Partners:
gsl3127
ORF_ID:gsl3127; hypothetical protein.
       0.682
gll2701
ORF_ID:gll2701; hypothetical protein.
  
     0.472
pheS
phenylalanyl-tRNA synthetase alpha chain; ORF_ID:glr3128; Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily.
       0.458
fbp
Fructose 1,6-bisphosphatase; ORF_ID:glr3129.
       0.458
gll2474
ORF_ID:gll2474; hypothetical protein.
  
     0.408
Your Current Organism:
Gloeobacter violaceus
NCBI taxonomy Id: 251221
Other names: G. violaceus PCC 7421, Gloeobacter violaceus ATCC 29082, Gloeobacter violaceus PCC 7421, Gloeobacter violaceus str. PCC 7421, Gloeobacter violaceus strain PCC 7421
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.