STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gsr3177ORF_ID:gsr3177; hypothetical protein; Belongs to the UPF0367 family. (93 aa)    
Predicted Functional Partners:
gsr0107
ORF_ID:gsr0107; hypothetical protein.
  
     0.772
glr0411
ORF_ID:glr0411; hypothetical protein.
  
     0.772
gsl1620
DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.
  
     0.772
glr3755
ORF_ID:glr3755; hypothetical protein.
  
     0.772
gll4380
ORF_ID:gll4380; hypothetical protein.
  
     0.772
gll0144
ORF_ID:gll0144; hypothetical protein.
  
     0.771
glr0196
ORF_ID:glr0196; hypothetical protein.
  
     0.771
glr2814
ORF_ID:glr2814; hypothetical protein.
  
     0.770
gsl3751
ORF_ID:gsl3751; hypothetical protein.
  
     0.767
glr0782
ORF_ID:glr0782; hypothetical protein.
  
     0.766
Your Current Organism:
Gloeobacter violaceus
NCBI taxonomy Id: 251221
Other names: G. violaceus PCC 7421, Gloeobacter violaceus ATCC 29082, Gloeobacter violaceus PCC 7421, Gloeobacter violaceus str. PCC 7421, Gloeobacter violaceus strain PCC 7421
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.