Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| cobB | cobH | gene:10761211 | gene:10757856 | Cobyrinic acid a,c-diamide synthase; Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of cobyrinate, using either L-glutamine or ammonia as the nitrogen source; Belongs to the CobB/CbiA family. | Precorrin isomerase; ORF_ID:gll0384. | 0.997 |
| cobB | cobJ | gene:10761211 | gene:10760046 | Cobyrinic acid a,c-diamide synthase; Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of cobyrinate, using either L-glutamine or ammonia as the nitrogen source; Belongs to the CobB/CbiA family. | Precorrin methylase; ORF_ID:gll2546. | 0.964 |
| cobB | cobL | gene:10761211 | gene:10757850 | Cobyrinic acid a,c-diamide synthase; Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of cobyrinate, using either L-glutamine or ammonia as the nitrogen source; Belongs to the CobB/CbiA family. | precorrin-6Y methylase; ORF_ID:gll0378. | 0.899 |
| cobB | cobN | gene:10761211 | gene:10760581 | Cobyrinic acid a,c-diamide synthase; Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of cobyrinate, using either L-glutamine or ammonia as the nitrogen source; Belongs to the CobB/CbiA family. | Cobalamin biosynthetic protein; ORF_ID:glr3076. | 0.958 |
| cobB | cobO | gene:10761211 | gene:10757857 | Cobyrinic acid a,c-diamide synthase; Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of cobyrinate, using either L-glutamine or ammonia as the nitrogen source; Belongs to the CobB/CbiA family. | cob(I)alamin adenosyltransferase; ORF_ID:glr0385. | 0.964 |
| cobB | cobP | gene:10761211 | gene:10758223 | Cobyrinic acid a,c-diamide synthase; Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of cobyrinate, using either L-glutamine or ammonia as the nitrogen source; Belongs to the CobB/CbiA family. | Bifunctional cobalamin biosynthesis protein; ORF_ID:glr0747. | 0.939 |
| cobB | cobQ | gene:10761211 | gene:10759264 | Cobyrinic acid a,c-diamide synthase; Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of cobyrinate, using either L-glutamine or ammonia as the nitrogen source; Belongs to the CobB/CbiA family. | Cobyric acid synthase; Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation. Belongs to the CobB/CobQ family. CobQ subfamily. | 0.987 |
| cobB | gll1330 | gene:10761211 | gene:10758813 | Cobyrinic acid a,c-diamide synthase; Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of cobyrinate, using either L-glutamine or ammonia as the nitrogen source; Belongs to the CobB/CbiA family. | ORF_ID:gll1330; probable periplasmic substrate-binding protein. | 0.885 |
| cobB | gll3511 | gene:10761211 | gene:10761023 | Cobyrinic acid a,c-diamide synthase; Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of cobyrinate, using either L-glutamine or ammonia as the nitrogen source; Belongs to the CobB/CbiA family. | ORF_ID:gll3511; probable cob(I)alamin adenolsyltransferase. | 0.944 |
| cobB | glr4320 | gene:10761211 | gene:10761839 | Cobyrinic acid a,c-diamide synthase; Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of cobyrinate, using either L-glutamine or ammonia as the nitrogen source; Belongs to the CobB/CbiA family. | ORF_ID:glr4320; hypothetical protein. | 0.940 |
| cobH | cobB | gene:10757856 | gene:10761211 | Precorrin isomerase; ORF_ID:gll0384. | Cobyrinic acid a,c-diamide synthase; Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of cobyrinate, using either L-glutamine or ammonia as the nitrogen source; Belongs to the CobB/CbiA family. | 0.997 |
| cobH | cobJ | gene:10757856 | gene:10760046 | Precorrin isomerase; ORF_ID:gll0384. | Precorrin methylase; ORF_ID:gll2546. | 0.999 |
| cobH | cobL | gene:10757856 | gene:10757850 | Precorrin isomerase; ORF_ID:gll0384. | precorrin-6Y methylase; ORF_ID:gll0378. | 0.999 |
| cobH | cobN | gene:10757856 | gene:10760581 | Precorrin isomerase; ORF_ID:gll0384. | Cobalamin biosynthetic protein; ORF_ID:glr3076. | 0.575 |
| cobH | cobO | gene:10757856 | gene:10757857 | Precorrin isomerase; ORF_ID:gll0384. | cob(I)alamin adenosyltransferase; ORF_ID:glr0385. | 0.718 |
| cobH | cobP | gene:10757856 | gene:10758223 | Precorrin isomerase; ORF_ID:gll0384. | Bifunctional cobalamin biosynthesis protein; ORF_ID:glr0747. | 0.722 |
| cobH | cobQ | gene:10757856 | gene:10759264 | Precorrin isomerase; ORF_ID:gll0384. | Cobyric acid synthase; Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation. Belongs to the CobB/CobQ family. CobQ subfamily. | 0.993 |
| cobJ | cobB | gene:10760046 | gene:10761211 | Precorrin methylase; ORF_ID:gll2546. | Cobyrinic acid a,c-diamide synthase; Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of cobyrinate, using either L-glutamine or ammonia as the nitrogen source; Belongs to the CobB/CbiA family. | 0.964 |
| cobJ | cobH | gene:10760046 | gene:10757856 | Precorrin methylase; ORF_ID:gll2546. | Precorrin isomerase; ORF_ID:gll0384. | 0.999 |
| cobJ | cobL | gene:10760046 | gene:10757850 | Precorrin methylase; ORF_ID:gll2546. | precorrin-6Y methylase; ORF_ID:gll0378. | 0.999 |
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