STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
glr3788ORF_ID:glr3788; unknown protein. (454 aa)    
Predicted Functional Partners:
glr3789
ORF_ID:glr3789; unknown protein.
       0.773
glr3786
ORF_ID:glr3786; unknown protein.
       0.696
glr3787
ORF_ID:glr3787; hypothetical protein.
       0.693
glr3785
ORF_ID:glr3785; hypothetical protein.
       0.663
glr3784
ORF_ID:glr3784; hypothetical protein.
       0.649
glr3790
ORF_ID:glr3790; probable glucosyltransferase.
       0.517
glr3782
ORF_ID:glr3782; unknown protein.
       0.450
glr3779
ORF_ID:glr3779; hypothetical protein.
       0.439
glr3780
ORF_ID:glr3780; unknown protein.
       0.439
glr3781
ORF_ID:glr3781; unknown protein.
       0.439
Your Current Organism:
Gloeobacter violaceus
NCBI taxonomy Id: 251221
Other names: G. violaceus PCC 7421, Gloeobacter violaceus ATCC 29082, Gloeobacter violaceus PCC 7421, Gloeobacter violaceus str. PCC 7421, Gloeobacter violaceus strain PCC 7421
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.