STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gll3791ORF_ID:gll3791; probable glycosyl transferase. (477 aa)    
Predicted Functional Partners:
gll2202
ORF_ID:gll2202; hypothetical protein.
 
  
 0.986
glr4310
ORF_ID:glr4310; hypothetical protein.
 
  
 0.986
glr3785
ORF_ID:glr3785; hypothetical protein.
 
  
 0.985
glr1861
DegT/DnrJ/EryC1/StrS family protein; ORF_ID:glr1861; Belongs to the DegT/DnrJ/EryC1 family.
 
  
 0.979
glr0454
ORF_ID:glr0454; unknown protein.
 
  
 0.978
gll1796
ORF_ID:gll1796; unknown protein.
 
  
 0.978
gll3716
ORF_ID:gll3716; unknown protein.
 
  
 0.978
gll0763
GDP-D-mannose dehydratase; Catalyzes the conversion of GDP-D-mannose to GDP-4-dehydro-6- deoxy-D-mannose.
  
  
 0.956
gll0764
GDP-D-mannose dehydratase; Catalyzes the conversion of GDP-D-mannose to GDP-4-dehydro-6- deoxy-D-mannose.
  
  
 0.956
glr3239
ORF_ID:glr3239; hypothetical protein.
 
  
 0.865
Your Current Organism:
Gloeobacter violaceus
NCBI taxonomy Id: 251221
Other names: G. violaceus PCC 7421, Gloeobacter violaceus ATCC 29082, Gloeobacter violaceus PCC 7421, Gloeobacter violaceus str. PCC 7421, Gloeobacter violaceus strain PCC 7421
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