STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
glr3954ORF_ID:glr3954; porin; major outer membrane protein; Belongs to the OprB family. (567 aa)    
Predicted Functional Partners:
gll2308
ORF_ID:gll2308; hypothetical protein.
  
     0.774
gll2309
ORF_ID:gll2309; hypothetical protein.
  
     0.773
ycf84
Ycf84 protein; ORF_ID:glr0931; hypothetical protein.
  
     0.767
ycf84-2
Ycf84 protein; ORF_ID:gll3333; hypothetical protein.
  
     0.767
glr2940
ORF_ID:glr2940; hypothetical protein.
  
     0.759
glr1863
ORF_ID:glr1863; hypothetical protein.
  
     0.753
gll2539
ORF_ID:gll2539; hypothetical protein.
  
     0.749
gll2630
ORF_ID:gll2630; hypothetical protein.
  
     0.732
glr2814
ORF_ID:glr2814; hypothetical protein.
  
     0.730
gll2537
ORF_ID:gll2537; hypothetical protein.
  
     0.724
Your Current Organism:
Gloeobacter violaceus
NCBI taxonomy Id: 251221
Other names: G. violaceus PCC 7421, Gloeobacter violaceus ATCC 29082, Gloeobacter violaceus PCC 7421, Gloeobacter violaceus str. PCC 7421, Gloeobacter violaceus strain PCC 7421
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.