STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gll3995ORF_ID:gll3995; hypothetical protein. (113 aa)    
Predicted Functional Partners:
gsl3994
ORF_ID:gsl3994; hypothetical protein.
       0.773
gll3996
ORF_ID:gll3996; unknown protein.
       0.689
glr1589
ORF_ID:glr1589; unknown protein.
  
     0.637
gll3594
ORF_ID:gll3594; hypothetical protein.
  
     0.558
gll3997
ORF_ID:gll3997; hypothetical protein.
       0.552
gll1126
ORF_ID:gll1126; hypothetical protein.
  
     0.500
gsl0924
ORF_ID:gsl0924; hypothetical protein.
  
     0.479
gll2412
ORF_ID:gll2412; hypothetical protein.
  
     0.469
glr2673
ORF_ID:glr2673; hypothetical protein.
  
     0.461
glr2659
ORF_ID:glr2659; unknown protein.
  
  
 0.447
Your Current Organism:
Gloeobacter violaceus
NCBI taxonomy Id: 251221
Other names: G. violaceus PCC 7421, Gloeobacter violaceus ATCC 29082, Gloeobacter violaceus PCC 7421, Gloeobacter violaceus str. PCC 7421, Gloeobacter violaceus strain PCC 7421
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.