STRINGSTRING
ldh protein (Gloeobacter violaceus) - STRING interaction network
"ldh" - L-lactate dehydrogenase A chain in Gloeobacter violaceus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ldhL-lactate dehydrogenase A chain (330 aa)    
Predicted Functional Partners:
gll3323
Pyruvate kinase (473 aa)
   
  0.992
gll3495
Pyruvate kinase (605 aa)
   
  0.972
gll1094
2-oxoisovalerate dehydrogenase E1 component subunits alpha and beta (481 aa)
   
  0.967
gll1999
Pyruvate kinase (501 aa)
 
  0.964
gll2149
Malic enzyme (462 aa)
   
  0.959
glr2844
Pyruvate dehydrogenase E1 alpha-subunit; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) (331 aa)
   
  0.953
glr1529
Pyruvate dehydrogenase E1 component alpha; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) (334 aa)
   
  0.953
glr2846
Pyruvate dehydrogenase E1 beta-subunit (327 aa)
   
  0.938
glr1530
Pyruvate dehydrogenase E1 component beta (327 aa)
   
  0.938
glr2600
Aspartate aminotransferase (395 aa)
   
 
  0.937
Your Current Organism:
Gloeobacter violaceus
NCBI taxonomy Id: 251221
Other names: G. violaceus, G. violaceus PCC 7421, Gloeobacter, Gloeobacter violaceus, Gloeobacter violaceus ATCC 29082, Gloeobacter violaceus PCC 7421, Gloeobacter violaceus str. PCC 7421, Gloeobacter violaceus strain PCC 7421, Gloeobacterales, Gloeobacterales Cavalier-Smith 2002, Gloeobacteria, Gloeobacteria Cavalier-Smith 2002
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