STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
glr1538Chromophore lyase CpcT/CpeT 4; Covalently attaches a chromophore to Cys residue(s) of phycobiliproteins. (183 aa)    
Predicted Functional Partners:
apcA
Allophycocyanin alpha subunit; ORF_ID:glr1246.
  
   
 0.805
cpcB
Phycocyanin beta chain; ORF_ID:glr1184.
  
   
 0.800
cpcB-2
Phycocyanin beta chain; ORF_ID:glr3217.
  
   
 0.800
cpcA
Phycocyanin alpha chain; ORF_ID:glr1185.
  
   
 0.796
cpcA-2
Phycocyanin alpha chain; ORF_ID:glr3218.
  
   
 0.796
apcB
Allophycocyanin beta subunit; ORF_ID:glr1247.
  
   
 0.794
apcF
Phycobilisome core component; ORF_ID:glr1930.
  
   
 0.793
apcC
Phycobilisome small core linker polypeptide; Rod linker protein, associated with allophycocyanin. Linker polypeptides determine the state of aggregation and the location of the disk-shaped phycobiliprotein units within the phycobilisome and modulate their spectroscopic properties in order to mediate a directed and optimal energy transfer.
  
   
 0.785
cpcC
Phycocyanin-associated rod linker protein; ORF_ID:glr0950; Belongs to the phycobilisome linker protein family.
 
   
 0.783
cpcC-2
Phycocyanin-associated rod linker protein; ORF_ID:gll3219; Belongs to the phycobilisome linker protein family.
 
   
 0.783
Your Current Organism:
Gloeobacter violaceus
NCBI taxonomy Id: 251221
Other names: G. violaceus PCC 7421, Gloeobacter violaceus ATCC 29082, Gloeobacter violaceus PCC 7421, Gloeobacter violaceus str. PCC 7421, Gloeobacter violaceus strain PCC 7421
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.