STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Chro_0007PFAM: Domain of unknown function (DUF2382); PRC-barrel domain; TIGRFAM: conserved domain; COGs: COG3861 conserved hypothetical protein; InterPro IPR007903:IPR019060:IPR011756; KEGG: ana:all4050 hypothetical protein; PFAM: Domain of unknown function DUF2382-like; PRC-barrel domain protein; SPTR: All4050 protein. (326 aa)    
Predicted Functional Partners:
Chro_0414
KEGG: npu:Npun_R1321 hypothetical protein; SPTR: Putative uncharacterized protein.
  
    0.776
Chro_2496
KEGG: npu:Npun_R3785 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.774
Chro_4353
KEGG: cyc:PCC7424_5261 hypothetical protein; SPTR: Putative uncharacterized protein.
 
    0.718
Chro_3075
Hypothetical protein; PFAM: ADP-ribosylglycohydrolase; KEGG: npu:Npun_R4568 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.713
Chro_1487
CsbD family protein; PFAM: CsbD-like; InterPro IPR008462; KEGG: ava:Ava_4678 CsbD-like; PFAM: CsbD family protein; SPTR: CsbD-like; Belongs to the UPF0337 (CsbD) family.
 
    0.711
Chro_0333
PFAM: Hemerythrin HHE cation binding domain; COGs: COG5592 conserved hypothetical protein; InterPro IPR012312; KEGG: npu:Npun_R0971 hemerythrin HHE cation binding domain-containing protein; PFAM: Hemerythrin HHE cation binding domain protein; SPTR: Hemerythrin HHE cation binding domain protein.
  
   
 0.709
Chro_3555
Metallophosphoesterase; PFAM: Calcineurin-like phosphoesterase; InterPro IPR004843; KEGG: npu:Npun_R3790 metallophosphoesterase; PFAM: metallophosphoesterase; SPTR: Metallophosphoesterase.
  
     0.706
psbD
Photosystem II D2 protein (photosystem q(a) protein); Photosystem II (PSII) is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation. The D1/D2 (PsbA/PsbA) reaction center heterodimer binds P680, the primary electron donor of PSII as well as several subsequent electron acceptors. D2 is needed for assembly of a s [...]
   
 
 0.703
psbD-2
Photosystem II D2 protein (photosystem q(a) protein); Photosystem II (PSII) is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation. The D1/D2 (PsbA/PsbA) reaction center heterodimer binds P680, the primary electron donor of PSII as well as several subsequent electron acceptors. D2 is needed for assembly of a s [...]
   
 
 0.703
Chro_2120
KEGG: ava:Ava_0421 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.679
Your Current Organism:
Chroococcidiopsis thermalis
NCBI taxonomy Id: 251229
Other names: C. thermalis PCC 7203, Chroococcidiopsis sp. ATCC 27900, Chroococcidiopsis sp. PCC 7203, Chroococcidiopsis thermalis PCC 7203, Chroococcidiopsis thermalis str. PCC 7203
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