STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Chro_0022KEGG: ava:Ava_0202 hypothetical protein; SPTR: Putative uncharacterized protein. (548 aa)    
Predicted Functional Partners:
Chro_0026
PFAM: Protein of unknown function (DUF3769); KEGG: ava:Ava_3002 hypothetical protein; SPTR: Putative uncharacterized protein.
  
  
 0.770
Chro_4401
KEGG: ava:Ava_4571 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.764
Chro_2720
KEGG: ava:Ava_0174 hypothetical protein; SPTR: Asl2353 protein.
  
     0.763
Chro_0305
KEGG: ava:Ava_4430 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.755
Chro_3346
KEGG: ava:Ava_2666 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.752
Chro_1468
KEGG: npu:Npun_F3852 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.748
Chro_3961
PFAM: Protein of unknown function (DUF2993); KEGG: mar:MAE_07750 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.739
Chro_0604
Protein of unknown function DUF2301, transmembrane; PFAM: Uncharacterized integral membrane protein (DUF2301); COGs: COG5413 Uncharacterized integral membrane protein; InterPro IPR019275; KEGG: ava:Ava_3793 hypothetical protein; PFAM: Protein of unknown function DUF2301, transmembrane; SPTR: Putative uncharacterized protein.
  
     0.732
Chro_4381
Abortive infection protein; PFAM: CAAX amino terminal protease family; InterPro IPR003675; KEGG: npu:Npun_F3898 abortive infection protein; PFAM: Abortive infection protein; SPTR: Abortive infection protein.
  
     0.729
Chro_5276
KEGG: npu:Npun_F4001 hypothetical protein; SPTR: Alr3364 protein.
  
     0.726
Your Current Organism:
Chroococcidiopsis thermalis
NCBI taxonomy Id: 251229
Other names: C. thermalis PCC 7203, Chroococcidiopsis sp. ATCC 27900, Chroococcidiopsis sp. PCC 7203, Chroococcidiopsis thermalis PCC 7203, Chroococcidiopsis thermalis str. PCC 7203
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.