STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Chro_0094FAD dependent oxidoreductase; InterPro IPR006076; KEGG: npu:Npun_R4207 hypothetical protein; PFAM: FAD dependent oxidoreductase; SPTR: Putative uncharacterized protein. (548 aa)    
Predicted Functional Partners:
Chro_1619
Zeta-carotene desaturase; Catalyzes the conversion of zeta-carotene to lycopene via the intermediary of neurosporene. It carries out two consecutive desaturations (introduction of double bonds) at positions C-7 and C-7'.
 
  
 0.959
Chro_4528
Carotene isomerase; PFAM: FAD dependent oxidoreductase; TIGRFAM: phytoene desaturase; carotene isomerase; COGs: COG1233 Phytoene dehydrogenase and related protein; InterPro IPR006076:IPR014101; KEGG: cyp:PCC8801_1308 carotene isomerase; PFAM: FAD dependent oxidoreductase; PRIAM: All-trans-retinol 13,14-reductase; SPTR: Carotene isomerase; TIGRFAM: carotene isomerase.
 
 
 0.956
Chro_5277
Hypothetical protein; COGs: COG0644 Dehydrogenase (flavoprotein); KEGG: ava:Ava_3214 hypothetical protein; SPTR: Putative uncharacterized protein.
  
  
 
0.921
Chro_5475
PFAM: FAD dependent oxidoreductase; COGs: COG1233 Phytoene dehydrogenase and related protein; InterPro IPR000759:IPR006076:IPR000172; KEGG: npu:Npun_F3745 FAD dependent oxidoreductase; PFAM: FAD dependent oxidoreductase; glucose-methanol-choline oxidoreductase; SPTR: FAD dependent oxidoreductase.
 
 
 0.921
Chro_4091
UDP-galactopyranose mutase; PFAM: Flavin containing amine oxidoreductase; Rieske [2Fe-2S] domain; COGs: COG3349 conserved hypothetical protein; InterProIPR017941:IPR005805:IPR000759:IPR000834:IPR 002937; KEGG: ana:alr2785 hypothetical protein; PFAM: amine oxidase; Rieske [2Fe-2S] iron-sulphur domain; SPTR: Alr2785 protein.
 
  
 0.919
Chro_3206
PFAM: Fatty acid desaturase; COGs: COG3239 Fatty acid desaturase; InterPro IPR005804; KEGG: npu:Npun_R4276 fatty acid desaturase; PFAM: fatty acid desaturase; SPTR: Fatty acid desaturase.
   
 
 0.916
Chro_2833
PFAM: Fatty acid desaturase; COGs: COG3239 Fatty acid desaturase; InterPro IPR005804; KEGG: npu:Npun_F4798 fatty acid desaturase; PFAM: fatty acid desaturase; SPTR: Fatty acid desaturase.
   
 
 0.906
Chro_0752
KEGG: npu:Npun_F0560 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.769
Chro_3440
Protein of unknown function DUF2358; PFAM: Uncharacterized conserved protein (DUF2358); InterPro IPR018790; KEGG: npu:Npun_R4203 hypothetical protein; PFAM: Protein of unknown function DUF2358; SPTR: Putative uncharacterized protein.
  
     0.768
Chro_2345
Abortive infection protein; PFAM: CAAX amino terminal protease family; InterPro IPR003675; KEGG: npu:Npun_R1914 abortive infection protein; PFAM: Abortive infection protein; SPTR: CAAX amino terminal protease family.
 
    0.766
Your Current Organism:
Chroococcidiopsis thermalis
NCBI taxonomy Id: 251229
Other names: C. thermalis PCC 7203, Chroococcidiopsis sp. ATCC 27900, Chroococcidiopsis sp. PCC 7203, Chroococcidiopsis thermalis PCC 7203, Chroococcidiopsis thermalis str. PCC 7203
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.