STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Chro_0212PFAM: Peptidase family M3; COGs: COG0339 Zn-dependent oligopeptidase; InterPro IPR001567; KEGG: ana:alr0880 oligopeptidase A; PFAM: peptidase M3A and M3B thimet/oligopeptidase F; PRIAM: Oligopeptidase A; SPTR: Peptidase family M3. (699 aa)    
Predicted Functional Partners:
Chro_3426
PFAM: Aminopeptidase P, N-terminal domain; Metallopeptidase family M24; COGs: COG0006 Xaa-Pro aminopeptidase; InterPro IPR001131:IPR007865:IPR000994; KEGG: npu:Npun_F1350 peptidase M24; PFAM: peptidase M24; peptidase M24B X-Pro dipeptidase/aminopeptidase domain protein; SPTR: Peptidase M24; Belongs to the peptidase M24B family.
 
 
 
 0.502
Chro_0213
PFAM: CheW-like domain; InterPro IPR002545; KEGG: cyc:PCC7424_2779 CheW protein; PFAM: CheW domain protein; SMART: CheW domain protein; SPTR: Putative uncharacterized protein.
     
 0.480
Chro_4981
KEGG: naz:Aazo_3537 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.457
Chro_5098
ATP-binding region ATPase domain protein; Molecular chaperone. Has ATPase activity.
  
  
 0.447
Chro_4705
KEGG: ava:Ava_1978 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.433
Your Current Organism:
Chroococcidiopsis thermalis
NCBI taxonomy Id: 251229
Other names: C. thermalis PCC 7203, Chroococcidiopsis sp. ATCC 27900, Chroococcidiopsis sp. PCC 7203, Chroococcidiopsis thermalis PCC 7203, Chroococcidiopsis thermalis str. PCC 7203
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