STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Chro_0275PFAM: Glycosyl transferase family 2; COGs: COG0463 Glycosyltransferase involved in cell wall biogenesis; InterPro IPR001173; KEGG: ana:all0915 hypothetical protein; PFAM: glycosyl transferase family 2; SPTR: Glycosyl transferase, group 2 family protein. (287 aa)    
Predicted Functional Partners:
Chro_1204
PFAM: Glycosyl transferase family 2; COGs: COG0463 Glycosyltransferase involved in cell wall biogenesis; InterPro IPR001173; KEGG: sat:SYN_02665 glycosyltransferase; PFAM: glycosyl transferase family 2; SPTR: Glycosyltransferase.
  
     0.774
Chro_0276
PFAM: ABC transporter; TOBE domain; COGs: COG3842 ABC-type spermidine/putrescine transport systems ATPase components; InterPro IPR003439:IPR013611:IPR003593:IPR017871; KEGG: prw:PsycPRwf_1061 putrescine/spermidine ABC transporter ATPase protein; PFAM: ABC transporter related; Transport-associated OB domain-containing protein; SMART: AAA ATPase; SPTR: Spermidine/putrescine ABC transporter ATPase subunit.
       0.773
Chro_2484
PFAM: Glycosyl transferase family 2; COGs: COG0463 Glycosyltransferase involved in cell wall biogenesis; InterPro IPR001173; KEGG: fph:Fphi_1478 glycosyl transferase family protein; PFAM: glycosyl transferase family 2; SPTR: Glycosyl transferase, family 2.
  
     0.770
Chro_0725
PFAM: Glycosyl transferase family 2; COGs: COG0463 Glycosyltransferase involved in cell wall biogenesis; InterPro IPR001173; KEGG: npu:Npun_F0047 glycosyl transferase family protein; PFAM: glycosyl transferase family 2; SPTR: Probable glycosyl transferase.
  
     0.767
Chro_1633
PFAM: Glycosyl transferase family 2; COGs: COG1216 glycosyltransferase; InterPro IPR001173; KEGG: ava:Ava_2064 glycosyl transferase family protein; PFAM: glycosyl transferase family 2; SPTR: Glycosyl transferase, family 2.
  
     0.757
Chro_1375
PFAM: Glycosyl transferase family 2; InterPro IPR001173; KEGG: ter:Tery_3753 methyltransferase type 11; PFAM: glycosyl transferase family 2; SPTR: Methyltransferase type 11.
  
     0.749
Chro_4806
PFAM: Glycosyl transferase family 2; COGs: COG1216 glycosyltransferase; InterPro IPR001173; KEGG: chu:CHU_0884 b-glycosyltransferase; PFAM: glycosyl transferase family 2; SPTR: Glycosyl transferase, group 2 family protein.
 
     0.730
Chro_3956
PFAM: Glycosyl transferase family 2; InterPro IPR001173; KEGG: cyc:PCC7424_0330 glycosyl transferase family 2; PFAM: glycosyl transferase family 2; SPTR: Glycosyl transferase, family 2.
  
     0.719
Chro_4609
PFAM: Predicted glycosyltransferase involved in capsule biosynthesis; Glycosyl transferase family 2; COGs: COG1216 glycosyltransferase; InterPro IPR001173; KEGG: cyc:PCC7424_4195 glycosyl transferase family 2; PFAM: glycosyl transferase family 2; SPTR: Glycosyl transferase family 2.
  
    0.586
Chro_0277
PFAM: DNA gyrase/topoisomerase IV, subunit A; DNA gyrase C-terminal domain, beta-propeller; TIGRFAM: DNA gyrase, A subunit; COGs: COG0188 Type IIA topoisomerase (DNA gyrase/topo II topoisomerase IV) A subunit; InterPro IPR002205:IPR006691:IPR005743; KEGG: npu:Npun_R6377 DNA gyrase, A subunit; PFAM: DNA gyrase/topoisomerase IV subunit A; DNA gyrase repeat beta-propeller; PRIAM: DNA topoisomerase (ATP-hydrolyzing); SMART: DNA gyrase/topoisomerase IV subunit A; SPTR: DNA gyrase, A subunit; TIGRFAM: DNA gyrase, A subunit.
       0.538
Your Current Organism:
Chroococcidiopsis thermalis
NCBI taxonomy Id: 251229
Other names: C. thermalis PCC 7203, Chroococcidiopsis sp. ATCC 27900, Chroococcidiopsis sp. PCC 7203, Chroococcidiopsis thermalis PCC 7203, Chroococcidiopsis thermalis str. PCC 7203
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