STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Chro_0330PFAM: Inositol monophosphatase family; COGs: COG0483 fructose-1 6-bisphosphatase of inositol monophosphatase family; InterPro IPR020583:IPR020550:IPR000760; KEGG: ana:all2917 inositol monophophatase family protein; PFAM: inositol monophosphatase; SPTR: Inositol monophophatase family. (276 aa)    
Predicted Functional Partners:
Chro_3488
PFAM: Inositol monophosphatase family; COGs: COG0483 fructose-1 6-bisphosphatase of inositol monophosphatase family; InterPro IPR020583:IPR020550:IPR000760; KEGG: npu:Npun_F4521 inositol monophosphatase; PFAM: inositol monophosphatase; SPTR: Inositol monophosphatase.
  
  
0.926
Chro_2524
PFAM: NUDIX domain; COGs: COG1051 ADP-ribose pyrophosphatase; InterPro IPR020476:IPR020084:IPR000086; KEGG: ava:Ava_1823 NUDIX hydrolase; PFAM: NUDIX hydrolase; SPTR: NUDIX hydrolase; Belongs to the Nudix hydrolase family.
 
    0.900
Chro_4753
PFAM: Inositol monophosphatase family; COGs: COG0483 fructose-1 6-bisphosphatase of inositol monophosphatase family; InterPro IPR000760; KEGG: npu:Npun_F6323 inositol monophosphatase; PFAM: inositol monophosphatase; SPTR: Inositol monophosphatase.
     
  0.900
Chro_0075
Metal dependent phosphohydrolase; PFAM: HD domain; COGs: COG0317 Guanosine polyphosphate pyrophosphohydrolase/synthetase; InterPro IPR006674:IPR003607; KEGG: ana:all4671 hypothetical protein; PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; SPTR: HD domain protein.
 
 
  
 0.775
nusA
NusA antitermination factor; Participates in both transcription termination and antitermination.
   
   0.764
Chro_0331
Nuclease (SNase domain-containing protein); PFAM: Staphylococcal nuclease homologue; COGs: COG1525 Micrococcal nuclease (thermonuclease) homologs; InterPro IPR006021; KEGG: ava:Ava_0982 nuclease (SNase-like); PFAM: nuclease (SNase domain-containing protein); SMART: nuclease (SNase domain-containing protein); SPTR: Staphylococcal nuclease family protein, putative.
       0.761
rpoZ
DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.
   
   0.744
rpoB
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
   0.743
Chro_0332
Ferredoxin (2Fe-2S); PFAM: 2Fe-2S iron-sulfur cluster binding domain; TIGRFAM: ferredoxin [2Fe-2S]; COGs: COG0633 Ferredoxin; InterPro IPR006058:IPR001041:IPR010241; KEGG: npu:Npun_F1157 ferredoxin (2Fe-2S); PFAM: ferredoxin; SPTR: Ferredoxin (2Fe-2S); TIGRFAM: ferredoxin [2Fe-2S].
       0.702
hisZ
histidyl-tRNA synthetase 2; Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine.
     
 0.665
Your Current Organism:
Chroococcidiopsis thermalis
NCBI taxonomy Id: 251229
Other names: C. thermalis PCC 7203, Chroococcidiopsis sp. ATCC 27900, Chroococcidiopsis sp. PCC 7203, Chroococcidiopsis thermalis PCC 7203, Chroococcidiopsis thermalis str. PCC 7203
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