STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Chro_0338KEGG: tel:tlr2299 hypothetical protein; SPTR: Tlr2299 protein. (173 aa)    
Predicted Functional Partners:
Chro_0337
4-vinyl reductase 4VR; PFAM: V4R domain; COGs: COG1719 hydrocarbon binding protein (contains V4R domain); InterPro IPR004096; KEGG: cyh:Cyan8802_1082 4-vinyl reductase 4VR; PFAM: 4-vinyl reductase 4VR; SPTR: 4-vinyl reductase 4VR.
       0.787
Chro_0339
KEGG: cyn:Cyan7425_3171 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.764
Chro_0340
4-vinyl reductase 4VR; PFAM: V4R domain; COGs: COG1719 hydrocarbon binding protein (contains V4R domain); InterPro IPR004096; KEGG: tel:tlr2301 hypothetical protein; PFAM: 4-vinyl reductase 4VR; SPTR: Tlr2301 protein.
       0.607
Chro_0341
Ferredoxin; PFAM: 2Fe-2S iron-sulfur cluster binding domain; COGs: COG0633 Ferredoxin; InterPro IPR001041; KEGG: tel:tlr2302 putative ferredoxin; PFAM: ferredoxin; SPTR: Tlr2302 protein.
       0.527
Chro_0342
Phycocyanin; PFAM: Phycobilisome protein; InterPro IPR012128; KEGG: syn:slr0149 hypothetical protein; PFAM: Phycocyanin; SPTR: Slr0149 protein.
       0.425
Your Current Organism:
Chroococcidiopsis thermalis
NCBI taxonomy Id: 251229
Other names: C. thermalis PCC 7203, Chroococcidiopsis sp. ATCC 27900, Chroococcidiopsis sp. PCC 7203, Chroococcidiopsis thermalis PCC 7203, Chroococcidiopsis thermalis str. PCC 7203
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