STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Chro_0373PFAM: Protein kinase domain; WD domain, G-beta repeat; COGs: COG2319 FOG: WD40 repeat; InterProIPR017441:IPR019775:IPR020635:IPR002290:IPR 001680:IPR000719:IPR019782:IPR017986:IPR017442:IPR019781:I PR020472; KEGG: ter:Tery_1627 WD-40 repeat-containing serine/threonin protein kinase; PFAM: Serine/threonine-protein kinase-like domain; WD40 repeat, subgroup; SMART: serine/threonine protein kinase; Tyrosine-protein kinase, catalytic domain; WD-40 repeat-containing protein; SPTR: Putative uncharacterized protein. (620 aa)    
Predicted Functional Partners:
Chro_3681
Protein of unknown function DUF323; PFAM: Formylglycine-generating sulfatase enzyme; COGs: COG1262 conserved hypothetical protein; InterPro IPR005532; KEGG: cyn:Cyan7425_2998 protein of unknown function DUF323; PFAM: protein of unknown function DUF323; SPTR: Putative uncharacterized protein.
  
 0.786
Chro_4499
PFAM: Protein phosphatase 2C; COGs: COG0631 Serine/threonine protein phosphatase; InterPro IPR001932:IPR014045; KEGG: naz:Aazo_2712 protein serine/threonine phosphatase; PFAM: Protein phosphatase 2C-like; SMART: protein phosphatase 2C domain protein; SPTR: Protein serine/threonine phosphatase.
 
 
 0.778
Chro_3941
PFAM: Protein phosphatase 2C; COGs: COG0631 Serine/threonine protein phosphatase; InterPro IPR014045:IPR001932; KEGG: ava:Ava_A0002 protein serine/threonine phosphatase; PFAM: Protein phosphatase 2C-like; SMART: protein phosphatase 2C domain protein; SPTR: Protein serine/threonine phosphatase.
 
 
 0.768
Chro_2296
PFAM: Protein phosphatase 2C; COGs: COG0631 Serine/threonine protein phosphatase; InterPro IPR018886:IPR014045:IPR001932; KEGG: npu:Npun_R0694 putative protein serine/threonine phosphatase; PFAM: Uncharacterised protein family UPF0547; Protein phosphatase 2C-like; SMART: protein phosphatase 2C domain protein; SPTR: Protein serine/threonine phosphatase.
 
 
 0.760
Chro_4163
PFAM: Protein kinase domain; COGs: COG0515 Serine/threonine protein kinase; InterProIPR000719:IPR017441:IPR008271:IPR020635:IPR 002290:IPR017442; KEGG: npu:Npun_F3464 serine/threonine protein kinase; PFAM: Serine/threonine-protein kinase-like domain; SMART: serine/threonine protein kinase; Tyrosine-protein kinase, catalytic domain; SPTR: Serine/threonine protein kinase.
 
    0.760
Chro_0374
PFAM: Tryptophan-rich protein (DUF2389); TIGRFAM: tryptophan-rich conserved hypothetical protein; InterPro IPR012663; KEGG: npu:Npun_R4423 hypothetical protein; PFAM: Conserved hypothetical protein CHP02450, tryptophan-rich; SPTR: Putative uncharacterized protein.
       0.757
Chro_4160
Tetratricopeptide TPR_1 repeat-containing protein; PFAM: Tetratricopeptide repeat; COGs: COG0457 FOG: TPR repeat; InterPro IPR019734:IPR013026:IPR001440; KEGG: amr:AM1_G0032 TPR repeat-containing protein; PFAM: Tetratricopeptide TPR_1 repeat-containing protein; SMART: Tetratricopeptide repeat; SPTR: TPR repeat protein.
 0.674
alaS
alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain.
  
 0.597
Chro_5584
Beta-lactamase domain-containing protein; PFAM: Metallo-beta-lactamase superfamily; COGs: COG1236 exonuclease of the beta-lactamase fold involved in RNA processing; InterPro IPR001307; KEGG: npu:Npun_R1387 beta-lactamase domain-containing protein; SPTR: PsoR.
    
 0.593
Chro_0372
Conserved repeat domain protein; PFAM: Domain of unknown function DUF11; TIGRFAM: parallel beta-helix repeat (two copies); conserved repeat domain; InterPro IPR006626:IPR001434; KEGG: rbi:RB2501_02035 hypothetical protein; PFAM: protein of unknown function DUF11; SPTR: Putative uncharacterized protein; TIGRFAM: conserved repeat domain protein.
  
  
 0.543
Your Current Organism:
Chroococcidiopsis thermalis
NCBI taxonomy Id: 251229
Other names: C. thermalis PCC 7203, Chroococcidiopsis sp. ATCC 27900, Chroococcidiopsis sp. PCC 7203, Chroococcidiopsis thermalis PCC 7203, Chroococcidiopsis thermalis str. PCC 7203
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