STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Chro_0544Hypothetical protein; PFAM: Ureidoglycolate hydrolase; KEGG: ava:Ava_0888 hypothetical protein; SPTR: Putative uncharacterized protein. (198 aa)    
Predicted Functional Partners:
Chro_4948
PFAM: Cupin domain; COGs: COG0662 Mannose-6-phosphate isomerase; InterPro IPR013096; KEGG: ava:Ava_1579 TonB box-like; PFAM: Cupin 2 conserved barrel domain protein; SPTR: TonB box-like protein.
  
     0.758
Chro_2239
KEGG: cyn:Cyan7425_4074 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.741
Chro_2238
KEGG: ana:alr4045 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.719
Chro_1644
Tocopherol cyclase; KEGG: ana:all0245 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.705
Chro_0382
PFAM: Protein of unknown function (DUF1230); InterPro IPR009631; KEGG: naz:Aazo_2514 hypothetical protein; PFAM: protein of unknown function DUF1230; SPTR: Putative uncharacterized protein.
  
     0.674
Chro_5569
KEGG: ava:Ava_0863 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.670
Chro_1245
PFAM: Saccharopine dehydrogenase; COGs: COG1748 Saccharopine dehydrogenase and related protein; InterPro IPR005097; KEGG: npu:Npun_R2958 saccharopine dehydrogenase; PFAM: Saccharopine dehydrogenase; SPTR: Saccharopine dehydrogenase.
  
     0.662
Chro_0094
FAD dependent oxidoreductase; InterPro IPR006076; KEGG: npu:Npun_R4207 hypothetical protein; PFAM: FAD dependent oxidoreductase; SPTR: Putative uncharacterized protein.
  
     0.622
Chro_0409
KEGG: npu:Npun_F3847 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.622
Chro_1336
PFAM: DnaJ domain; InterPro IPR001623; KEGG: npu:Npun_R5579 heat shock protein DnaJ domain-containing protein; PFAM: heat shock protein DnaJ domain protein; SMART: heat shock protein DnaJ domain protein; SPTR: DnaJ domain protein.
  
     0.622
Your Current Organism:
Chroococcidiopsis thermalis
NCBI taxonomy Id: 251229
Other names: C. thermalis PCC 7203, Chroococcidiopsis sp. ATCC 27900, Chroococcidiopsis sp. PCC 7203, Chroococcidiopsis thermalis PCC 7203, Chroococcidiopsis thermalis str. PCC 7203
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