STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Chro_0759KEGG: ana:asl4034 hypothetical protein; SPTR: UPF0426 protein asl4034. (72 aa)    
Predicted Functional Partners:
Chro_0604
Protein of unknown function DUF2301, transmembrane; PFAM: Uncharacterized integral membrane protein (DUF2301); COGs: COG5413 Uncharacterized integral membrane protein; InterPro IPR019275; KEGG: ava:Ava_3793 hypothetical protein; PFAM: Protein of unknown function DUF2301, transmembrane; SPTR: Putative uncharacterized protein.
  
     0.741
Chro_1644
Tocopherol cyclase; KEGG: ana:all0245 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.733
Chro_1419
PFAM: Domain of unknown function (DUF1817); COGs: COG5474 conserved hypothetical protein; InterPro IPR014946; KEGG: naz:Aazo_0313 hypothetical protein; PFAM: Domain of unknown function DUF1817; SPTR: Putative uncharacterized protein.
  
     0.732
Chro_1763
KEGG: ava:Ava_1424 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.719
Chro_2510
High light inducible protein; PFAM: Chlorophyll A-B binding protein; KEGG: ava:Ava_1411 high light inducible protein; SPTR: CAB/ELIP/HLIP superfamily of protein.
  
     0.715
Chro_3342
S-layer domain-containing protein; PFAM: S-layer homology domain; InterPro IPR001119; KEGG: npu:Npun_F5765 S-layer domain-containing protein; PFAM: S-layer domain-containing protein; SPTR: S-layer domain protein.
  
     0.714
Chro_5314
PFAM: RbcX protein; InterPro IPR003435; KEGG: npu:Npun_F4196 chaperonin family protein RbcX; PFAM: chaperonin family protein RbcX; SPTR: Chaperonin-like protein.
  
     0.702
Chro_0560
PFAM: Polyketide cyclase / dehydrase and lipid transport; InterPro IPR019587; KEGG: naz:Aazo_1945 polyketide cyclase/dehydrase; PFAM: Polyketide cyclase/dehydrase; SPTR: Putative uncharacterized protein.
  
     0.697
Chro_1964
High light inducible protein; PFAM: Chlorophyll A-B binding protein; KEGG: npu:Npun_R6375 high light inducible protein; SPTR: CAB/ELIP/HLIP superfamily of protein.
  
     0.689
Chro_0267
KEGG: npu:Npun_F0178 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.688
Your Current Organism:
Chroococcidiopsis thermalis
NCBI taxonomy Id: 251229
Other names: C. thermalis PCC 7203, Chroococcidiopsis sp. ATCC 27900, Chroococcidiopsis sp. PCC 7203, Chroococcidiopsis thermalis PCC 7203, Chroococcidiopsis thermalis str. PCC 7203
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