STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Chro_0787PFAM: Protein of unknown function (DUF990); COGs: COG4587 ABC-type uncharacterized transport system permease component; InterPro IPR010390; KEGG: cyn:Cyan7425_2498 protein of unknown function DUF990; PFAM: protein of unknown function DUF990; SPTR: Putative uncharacterized protein. (282 aa)    
Predicted Functional Partners:
Chro_0027
PFAM: ABC transporter; COGs: COG4586 ABC-type uncharacterized transport system ATPase component; InterPro IPR003439:IPR003593:IPR017871; KEGG: cyn:Cyan7425_2497 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: ABC transporter related.
 
  
 0.868
Chro_5135
PFAM: Protein of unknown function (DUF990); COGs: COG3694 ABC-type uncharacterized transport system permease component; InterPro IPR010390; KEGG: npu:Npun_R4626 hypothetical protein; PFAM: protein of unknown function DUF990; SPTR: Putative uncharacterized protein.
 
  
 0.861
Chro_0786
PFAM: AhpC/TSA family; COGs: COG1225 Peroxiredoxin; InterPro IPR017936:IPR000866; KEGG: ava:Ava_0435 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen; PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; SPTR: Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen.
       0.494
Chro_0020
TPR repeat-containing protein; InterPro IPR019734:IPR013026; KEGG: ava:Ava_0204 TPR repeat-containing protein; SPTR: Alr2386 protein.
  
     0.490
Chro_0788
Hypothetical protein; InterPro IPR006624; KEGG: scl:sce9098 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.478
Chro_2628
PFAM: Cytochrome c; InterPro IPR009056:IPR003088; KEGG: ava:Ava_4020 cytochrome c, class I; PFAM: cytochrome c class I; SPTR: Cytochrome; manually curated.
  
     0.471
ndhO
Hypothetical protein; NDH-1 shuttles electrons from an unknown electron donor, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory and/or the photosynthetic chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient. Cyanobacterial NDH-1 also plays a role in inorganic carbon-concentration.
  
     0.409
Your Current Organism:
Chroococcidiopsis thermalis
NCBI taxonomy Id: 251229
Other names: C. thermalis PCC 7203, Chroococcidiopsis sp. ATCC 27900, Chroococcidiopsis sp. PCC 7203, Chroococcidiopsis thermalis PCC 7203, Chroococcidiopsis thermalis str. PCC 7203
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