STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Chro_0827PFAM: GMC oxidoreductase; COGs: COG2303 Choline dehydrogenase and related flavoprotein; InterPro IPR003953:IPR007867; KEGG: ava:Ava_B0176 glucose-methanol-choline oxidoreductase; PFAM: GMC oxidoreductase; fumarate reductase/succinate dehydrogenase flavoprotein domain protein; SPTR: Glucose-methanol-choline oxidoreductase. (500 aa)    
Predicted Functional Partners:
Chro_0828
PFAM: Cytochrome c oxidase subunit III; COGs: COG1845 Heme/copper-type cytochrome/quinol oxidase subunit 3; InterPro IPR000298; KEGG: cyt:cce_4111 cytochrome c oxidase subunit III; PFAM: cytochrome c oxidase subunit III; PRIAM: Cytochrome-c oxidase; SPTR: Cytochrome c oxidase, subunit III.
 
     0.810
Chro_0829
Cytochrome c oxidase, subunit I; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B.
       0.785
Chro_0830
Cytochrome c oxidase subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).
 
     0.750
Chro_0832
PFAM: Predicted membrane protein (DUF2231); COGs: COG4244 membrane protein; KEGG: ter:Tery_0280 hypothetical protein; SPTR: Putative uncharacterized protein.
 
     0.748
Chro_3611
Glyoxalase/bleomycin resistance protein/dioxygenase; InterPro IPR018146:IPR004360; KEGG: gvi:glr1161 hypothetical protein; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; SPTR: Glr1161 protein.
 
    0.708
Chro_1757
PFAM: Domain of unknown function (DUF1802); COGs: COG4293 conserved hypothetical protein; InterPro IPR008307:IPR014923; KEGG: ava:Ava_3099 hypothetical protein; PFAM: protein of unknown function DUF1802; SPTR: Putative uncharacterized protein.
  
     0.437
Chro_4794
Putative GAF sensor protein; PFAM: GAF domain; COGs: COG2203 FOG: GAF domain; InterPro IPR016132:IPR003018; KEGG: npu:Npun_F1883 putative GAF sensor protein; PFAM: GAF domain protein; SMART: GAF domain protein; SPTR: Putative GAF sensor protein.
  
     0.426
Your Current Organism:
Chroococcidiopsis thermalis
NCBI taxonomy Id: 251229
Other names: C. thermalis PCC 7203, Chroococcidiopsis sp. ATCC 27900, Chroococcidiopsis sp. PCC 7203, Chroococcidiopsis thermalis PCC 7203, Chroococcidiopsis thermalis str. PCC 7203
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