STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Chro_0905PFAM: ABC transporter; TIGRFAM: nitrate transport ATP-binding subunits C and D; COGs: COG1116 ABC-type nitrate/sulfonate/bicarbonate transport system ATPase component; InterPro IPR003439:IPR005890:IPR003593:IPR017871; KEGG: npu:Npun_R2353 nitrate ABC transporter, ATPase subunits C and D; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: Nitrate ABC transporter, ATPase subunits C and D; TIGRFAM: nitrate ABC transporter, ATPase subunits C and D. (288 aa)    
Predicted Functional Partners:
Chro_0902
COGs: COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components; KEGG: ava:Ava_1027 bicarbonate transport system substrate-binding protein; SPTR: Bicarbonate transport system substrate-binding protein.
 
 0.983
Chro_0903
PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: nitrate ABC transporter, permease protein; COGs: COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system permease component; InterPro IPR000515:IPR005889; KEGG: npu:Npun_R2355 nitrate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: Nitrate ABC transporter, inner membrane subunit; TIGRFAM: nitrate ABC transporter, inner membrane subunit.
 
 0.983
Chro_0904
PFAM: ABC transporter; NMT1/THI5 like; TIGRFAM: nitrate transport ATP-binding subunits C and D; COGs: COG1116 ABC-type nitrate/sulfonate/bicarbonate transport system ATPase component; InterPro IPR003439:IPR005890:IPR003593:IPR017871; KEGG: ava:Ava_1025 nitrate transport ATP-binding subunits C and D; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: Nitrate transport ATP-binding subunits C and D; TIGRFAM: nitrate ABC transporter, ATPase subunits C and D.
 
 
0.933
Chro_3569
Nitrate transport protein; COGs: COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components; InterPro IPR017909; KEGG: cyc:PCC7424_3527 nitrate transport protein; SPTR: Nitrate transport protein.
  
 0.910
Chro_4046
PFAM: ABC transporter; TIGRFAM: daunorubicin resistance ABC transporter ATP-binding subunit; COGs: COG1131 ABC-type multidrug transport system ATPase component; InterPro IPR003439:IPR003593; KEGG: ava:Ava_0191 ABC transporter-like; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: ABC transporter-like.
 
    
0.905
Chro_0141
Protein of unknown function DUF214; PFAM: Predicted permease; COGs: COG0577 ABC-type antimicrobial peptide transport system permease component; InterPro IPR003838; KEGG: cyn:Cyan7425_4734 protein of unknown function DUF214; PFAM: protein of unknown function DUF214; SPTR: Putative uncharacterized protein.
 
      0.899
Chro_3215
Protein of unknown function DUF214; PFAM: Predicted permease; COGs: COG0577 ABC-type antimicrobial peptide transport system permease component; InterPro IPR003838; KEGG: npu:Npun_F6383 hypothetical protein; PFAM: protein of unknown function DUF214; SPTR: Putative uncharacterized protein.
 
      0.899
Chro_0143
Protein of unknown function DUF214; PFAM: Predicted permease; COGs: COG0577 ABC-type antimicrobial peptide transport system permease component; InterPro IPR003838; KEGG: gvi:gll0345 hypothetical protein; PFAM: protein of unknown function DUF214; SPTR: Gll0345 protein.
 
      0.898
Chro_2717
PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: nitrate ABC transporter, permease protein; COGs: COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system permease component; InterPro IPR000515:IPR005889; KEGG: amr:AM1_5167 nitrate ABC transporter, permease protein; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: Nitrate ABC transporter, inner membrane subunit; TIGRFAM: nitrate ABC transporter, inner membrane subunit.
  
 0.894
Chro_3570
PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: nitrate ABC transporter, permease protein; COGs: COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system permease component; InterPro IPR005889:IPR000515; KEGG: ava:Ava_4541 nitrate transport permease; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: Nitrate transport permease; TIGRFAM: nitrate ABC transporter, inner membrane subunit.
  
 0.882
Your Current Organism:
Chroococcidiopsis thermalis
NCBI taxonomy Id: 251229
Other names: C. thermalis PCC 7203, Chroococcidiopsis sp. ATCC 27900, Chroococcidiopsis sp. PCC 7203, Chroococcidiopsis thermalis PCC 7203, Chroococcidiopsis thermalis str. PCC 7203
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.