STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Chro_0911Multisubunit sodium/proton antiporter, MrpE subunit; KEGG: ava:Ava_4788 hypothetical protein; SPTR: Putative uncharacterized protein; TC 2.A.63.1. (128 aa)    
Predicted Functional Partners:
Chro_0909
Multisubunit sodium/proton antiporter, MrpC subunit; PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 4L; COGs: COG1006 Multisubunit Na+/H+ antiporter MnhC subunit; InterPro IPR001133; KEGG: ava:Ava_4786 putative monovalent cation/H+ antiporter subunit C; PFAM: NADH-ubiquinone oxidoreductase chain 4L; SPTR: Putative uncharacterized protein; TC 2.A.63.1.
 
 
 0.999
Chro_0910
Multisubunit sodium/proton antiporter, MrpD subunit; PFAM: NADH-Ubiquinone/plastoquinone (complex I), various chains; COGs: COG0651 Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter MnhD subunit; InterPro IPR001750; KEGG: ava:Ava_4787 putative monovalent cation/H+ antiporter subunit D; PFAM: NADH/Ubiquinone/plastoquinone (complex I); SPTR: NADH dehydrogenase; TC 2.A.63.1.
 
 0.999
Chro_0913
Multisubunit sodium/proton antiporter, MrpG subunit; PFAM: Na+/H+ antiporter subunit; KEGG: cyc:PCC7424_2568 hypothetical protein; SPTR: Putative uncharacterized protein; TC 2.A.63.1.
 
 
 0.999
Chro_0915
Multisubunit sodium/proton antiporter, MrpB subunit; PFAM: Domain related to MnhB subunit of Na+/H+ antiporter; InterPro IPR007182; KEGG: ava:Ava_4791 putative monovalent cation/H+ antiporter subunit B; PFAM: Na+/H+ antiporter MnhB subunit-related protein; SPTR: Na+/H+ antiporter MnhB subunit-related protein; TC 2.A.63.1.
 
 
 0.998
Chro_0914
Hypothetical protein; COGs: COG1563 subunit of the Multisubunit Na+/H+ antiporter; KEGG: ana:all1838 hypothetical protein; SPTR: Putative uncharacterized protein.
 
 
 0.986
Chro_0912
Hypothetical protein; InterPro IPR017871; KEGG: cyt:cce_1683 hypothetical protein; SPTR: Putative uncharacterized protein.
 
   
 0.960
Chro_0058
NAD(P)H dehydrogenase, subunit NdhF3 family; PFAM: NADH-Ubiquinone/plastoquinone (complex I), various chains; TIGRFAM: NAD(P)H dehydrogenase, subunit NdhF3 family; COGs: COG1009 NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter MnhA subunit; InterPro IPR001750:IPR003916:IPR010217; KEGG: ava:Ava_0749 NAD(P)H-quinone oxidoreductase subunit F; PFAM: NADH/Ubiquinone/plastoquinone (complex I); PRIAM: NADH dehydrogenase (quinone); SPTR: NAD(P)H dehydrogenase, subunit NdhF3; TIGRFAM: NAD(P)H dehydrogenase, subunit NdhF3 family.
  
 
 0.899
Chro_1011
NAD(P)H dehydrogenase, subunit NdhF3 family; PFAM: NADH-Ubiquinone/plastoquinone (complex I), various chains; NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; TIGRFAM: NAD(P)H dehydrogenase, subunit NdhF3 family; COGs: COG1009 NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter MnhA subunit; InterProIPR003916:IPR018393:IPR010217:IPR001516:IPR 001750; KEGG: npu:Npun_R4290 NAD(P)H-quinone oxidoreductase subunit F; PFAM: NADH/Ubiquinone/plastoquinone (complex I); NADH-Ubiquinone oxidoreductase (complex I) chain 5/L domain protein; SPTR: NAD(P)H [...]
  
 
 0.899
Chro_5443
PFAM: NADH-Ubiquinone oxidoreductase (complex I), chain 5 C-terminus; NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; NADH-Ubiquinone/plastoquinone (complex I), various chains; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain L; COGs: COG1009 NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter MnhA subunit; InterProIPR003945:IPR003916:IPR018393:IPR001516:IPR 001750; KEGG: npu:Npun_R6185 NAD(P)H-quinone oxidoreductase subunit F; PFAM: NADH/Ubiquinone/plastoquinone (complex I); NADH-Ubiquinone oxidoreductase (complex I) chain [...]
  
 
 0.899
Chro_1749
KEGG: cyn:Cyan7425_5062 hypothetical protein; SPTR: Putative uncharacterized protein.
 
     0.694
Your Current Organism:
Chroococcidiopsis thermalis
NCBI taxonomy Id: 251229
Other names: C. thermalis PCC 7203, Chroococcidiopsis sp. ATCC 27900, Chroococcidiopsis sp. PCC 7203, Chroococcidiopsis thermalis PCC 7203, Chroococcidiopsis thermalis str. PCC 7203
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