STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Chro_1003Hypothetical protein; PFAM: Domain of unknown function (DUF1768); TIGRFAM: conserved hypothetical protein, ribA/ribD-fused; COGs: COG3236 conserved hypothetical protein; InterPro IPR012816; KEGG: naz:Aazo_3165 hypothetical protein; PFAM: Conserved hypothetical protein CHP02464; SPTR: Putative uncharacterized protein. (160 aa)    
Predicted Functional Partners:
Chro_4061
Diaminohydroxyphosphoribosylaminopyrimidine deaminase; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family.
 
    
 0.921
Chro_1219
PFAM: ATPase family associated with various cellular activities (AAA); Tetratricopeptide repeat; COGs: COG0464 ATPase of the AAA+ class; InterProIPR003959:IPR019734:IPR013026:IPR003960:IPR 003593; KEGG: ote:Oter_1429 ATPase central domain-containing protein; PFAM: AAA ATPase central domain protein; PRIAM: Microtubule-severing ATPase; SMART: AAA ATPase; Tetratricopeptide repeat; SPTR: AAA ATPase central domain protein.
 
 
 
 0.889
Chro_0255
AAA ATPase central domain protein; PFAM: ATPase family associated with various cellular activities (AAA); COGs: COG0464 ATPase of the AAA+ class; InterPro IPR003959:IPR003593; KEGG: ana:all4296 hypothetical protein; PFAM: AAA ATPase central domain protein; SMART: AAA ATPase; SPTR: All4296 protein.
   
 
 0.855
Chro_4419
AAA ATPase central domain protein; PFAM: ATPase family associated with various cellular activities (AAA); COGs: COG0464 ATPase of the AAA+ class; InterPro IPR003593:IPR003959; KEGG: npu:Npun_F0518 ATPase central domain-containing protein; PFAM: AAA ATPase central domain protein; SMART: AAA ATPase; SPTR: AAA ATPase, central region.
   
 
 0.855
ribBA
GTP cyclohydrolase II, 3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.
 
    
 0.655
Chro_2642
Exonuclease RNase T and DNA polymerase III; PFAM: Exonuclease; COGs: COG5018 Inhibitor of the KinA pathway to sporulation predicted exonuclease; InterPro IPR006055:IPR010916:IPR013520; KEGG: scl:sce4229 putative exonuclease; PFAM: Exonuclease RNase T and DNA polymerase III; SMART: Exonuclease; SPTR: Putative exonuclease.
  
     0.496
Chro_4416
KEGG: amr:AM1_2062 hypothetical protein; SPTR: Putative uncharacterized protein.
 
     0.430
Chro_1004
Transcriptional regulator, LysR family; PFAM: LysR substrate binding domain; Bacterial regulatory helix-turn-helix protein, lysR family; COGs: COG0583 Transcriptional regulator; InterPro IPR000847:IPR005119; KEGG: ava:Ava_4466 LysR family transcriptional regulator; PFAM: LysR substrate-binding; regulatory protein LysR; SPTR: Transcriptional regulator, LysR family.
       0.417
Your Current Organism:
Chroococcidiopsis thermalis
NCBI taxonomy Id: 251229
Other names: C. thermalis PCC 7203, Chroococcidiopsis sp. ATCC 27900, Chroococcidiopsis sp. PCC 7203, Chroococcidiopsis thermalis PCC 7203, Chroococcidiopsis thermalis str. PCC 7203
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