Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
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[Homology]
Score
Chro_1027PFAM: Response regulator receiver domain; COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains; InterPro IPR001789; KEGG: amr:AM1_0828 response regulator; PFAM: response regulator receiver; SMART: response regulator receiver; SPTR: Putative uncharacterized protein. (125 aa)    
Predicted Functional Partners:
Chro_1028
Multi-sensor signal transduction histidine kinase; PFAM: GAF domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Phytochrome region; His Kinase A (phosphoacceptor) domain; PAS fold; TIGRFAM: PAS domain S-box; COGs: COG5002 Signal transduction histidine kinase; InterProIPR004358:IPR000014:IPR003018:IPR013767:IPR 003661:IPR003594:IPR016132:IPR005467:IPR000700:IPR001610; KEGG: ana:all2699 two-component sensor histidine kinase; PFAM: ATP-binding region ATPase domain protein; GAF domain protein; PAS fold domain protein; histidine kinase A domain protein; SMART: ATP-binding regi [...]
 
 
   0.774
Chro_3116
Two component transcriptional regulator, AraC family; PFAM: Response regulator receiver domain; COGs: COG2207 AraC-type DNA-binding domain-containing protein; InterProIPR018062:IPR001789:IPR000005:IPR018060:IPR 020449; KEGG: npu:Npun_F4909 two component AraC family transcriptional regulator; PFAM: response regulator receiver; helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; response regulator receiver; SPTR: Two-component response regulator.
  
     0.763
Chro_5418
PFAM: Response regulator receiver domain; COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR001789; KEGG: npu:Npun_F2162 response regulator receiver, CheY; PFAM: response regulator receiver; SMART: response regulator receiver; SPTR: Putative uncharacterized protein.
  
     0.763
Chro_0098
PFAM: Response regulator receiver domain; COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR001789; KEGG: cyh:Cyan8802_2594 response regulator receiver protein; PFAM: response regulator receiver; SMART: response regulator receiver; SPTR: Two component transcriptional regulator, winged helix family.
  
     0.742
Chro_2085
PFAM: Response regulator receiver domain; COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains; InterPro IPR001789; KEGG: npu:Npun_R1448 response regulator receiver sensor signal transduction histidine kinase; PFAM: response regulator receiver; SMART: response regulator receiver; SPTR: Response regulator receiver domain protein.
  
 
   0.735
Chro_2078
PAS/PAC sensor signal transduction histidine kinase; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; PAS fold; FHA domain; TIGRFAM: PAS domain S-box; COGs: COG0642 Signal transduction histidine kinase; InterProIPR000014:IPR004358:IPR000253:IPR005467:IPR 013656:IPR003661:IPR003594; KEGG: amr:AM1_4537 two-component sensor histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; Forkhead-associated protein; SMART: ATP-binding region ATPase domain protein; histidine [...]
 
 
 0.728
Chro_1752
Multi-sensor signal transduction histidine kinase; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; PAS fold; TIGRFAM: PAS domain S-box; COGs: COG2205 Osmosensitive K+ channel histidine kinase; InterProIPR005467:IPR001789:IPR000014:IPR000700:IPR 003661:IPR003594:IPR004358:IPR013655; KEGG: amr:AM1_4537 two-component sensor histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; response regulator receiver; SMART: ATP-binding region ATPase domain protein; histidine [...]
 
 
 0.690
Chro_3051
Multi-sensor signal transduction histidine kinase; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; PAS fold; TIGRFAM: PAS domain S-box; COGs: COG0642 Signal transduction histidine kinase; InterProIPR003018:IPR013656:IPR003661:IPR003594:IPR 000014:IPR005467:IPR000700:IPR004358; KEGG: amr:AM1_4537 two-component sensor histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; GAF domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A doma [...]
 
 
 0.674
Chro_2690
Multi-sensor signal transduction histidine kinase; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; PAS fold; TIGRFAM: PAS domain S-box; COGs: COG5002 Signal transduction histidine kinase; InterProIPR005467:IPR000014:IPR000700:IPR001610:IPR 003661:IPR003594:IPR004358:IPR013655:IPR013656; KEGG: cyc:PCC7424_4549 multi-sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; SMART: ATP-binding region ATPase domain [...]
 
 
 0.660
Chro_4264
Multi-sensor signal transduction histidine kinase; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; CHASE3 domain; PAS fold; TIGRFAM: PAS domain S-box; COGs: COG5002 Signal transduction histidine kinase; InterProIPR005467:IPR000014:IPR000700:IPR004358:IPR 001610:IPR003661:IPR003594:IPR007891:IPR013656:IPR013767; KEGG: cyc:PCC7424_4549 multi-sensor signal transduction histidine kinase; PFAM: CHASE3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; histidine kinase A domain protein; ATP-binding region ATPase domain pr [...]
 
   0.652
Your Current Organism:
Chroococcidiopsis thermalis
NCBI taxonomy Id: 251229
Other names: C. thermalis PCC 7203, Chroococcidiopsis sp. ATCC 27900, Chroococcidiopsis sp. PCC 7203, Chroococcidiopsis thermalis PCC 7203, Chroococcidiopsis thermalis str. PCC 7203
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