STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Chro_1069Methyltransferase type 12; PFAM: Nodulation protein S (NodS); InterPro IPR013217; KEGG: gvi:glr3050 methyltransferase; PFAM: Methyltransferase type 12; SPTR: Glr3050 protein. (192 aa)    
Predicted Functional Partners:
Chro_1070
LmbE family protein; PFAM: GlcNAc-PI de-N-acetylase; COGs: COG2120 conserved hypothetical protein LmbE homologs; InterPro IPR003737; KEGG: gvi:glr3049 hypothetical protein; PFAM: LmbE family protein; SPTR: Glr3049 protein.
     0.988
Chro_1071
PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, N-terminal domain; COGs: COG1960 Acyl-CoA dehydrogenase; InterPro IPR006092:IPR013107; KEGG: gvi:glr3048 hypothetical protein; PFAM: acyl-CoA dehydrogenase domain-containing protein; Acyl-CoA dehydrogenase type 2 domain; SPTR: Glr3048 protein.
     0.968
Chro_0228
LmbE family protein; PFAM: GlcNAc-PI de-N-acetylase; COGs: COG2120 conserved hypothetical protein LmbE homologs; InterPro IPR003737; KEGG: naz:Aazo_3114 LmbE family protein; PFAM: LmbE family protein; SPTR: LmbE family protein.
     0.907
Chro_2854
PFAM: Glycosyl transferase family 2; InterPro IPR001173; KEGG: gvi:gll3051 hypothetical protein; PFAM: glycosyl transferase family 2; SPTR: Gll3051 protein.
  
     0.775
Chro_1073
Spore photoproduct lyase; COGs: COG1533 DNA repair photolyase; KEGG: npu:Npun_F6062 spore photoproduct lyase; SPTR: Spore photoproduct lyase.
 
     0.465
Chro_3821
PFAM: Domain of Unknown Function (DUF1206); InterPro IPR009597; KEGG: npu:Npun_R6105 hypothetical protein; PFAM: protein of unknown function DUF1206; SPTR: Putative uncharacterized protein.
  
     0.461
Chro_5142
PFAM: Domain of Unknown Function (DUF1206); InterPro IPR009597; KEGG: npu:Npun_R6105 hypothetical protein; PFAM: protein of unknown function DUF1206; SPTR: Putative uncharacterized protein.
  
     0.452
Your Current Organism:
Chroococcidiopsis thermalis
NCBI taxonomy Id: 251229
Other names: C. thermalis PCC 7203, Chroococcidiopsis sp. ATCC 27900, Chroococcidiopsis sp. PCC 7203, Chroococcidiopsis thermalis PCC 7203, Chroococcidiopsis thermalis str. PCC 7203
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.