STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Chro_1086PFAM: ABC transporter; TIGRFAM: ABC exporter ATP-binding subunit, DevA family; COGs: COG1136 ABC-type antimicrobial peptide transport system ATPase component; InterPro IPR014324:IPR003439:IPR017871:IPR003593; KEGG: ava:Ava_3638 ABC transporter-like; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: Alr3649 protein; TIGRFAM: ABC exporter ATP-binding subunit, DevA family. (249 aa)    
Predicted Functional Partners:
Chro_2355
Protein of unknown function DUF214; PFAM: Predicted permease; COGs: COG0577 ABC-type antimicrobial peptide transport system permease component; InterPro IPR003838; KEGG: ttj:TTHA1008 ABC transporter, permease protein; PFAM: protein of unknown function DUF214; SPTR: Macrolide specific ABC-type transporter, ATP-binding protein.
 
 0.954
Chro_3215
Protein of unknown function DUF214; PFAM: Predicted permease; COGs: COG0577 ABC-type antimicrobial peptide transport system permease component; InterPro IPR003838; KEGG: npu:Npun_F6383 hypothetical protein; PFAM: protein of unknown function DUF214; SPTR: Putative uncharacterized protein.
 
 0.954
Chro_0141
Protein of unknown function DUF214; PFAM: Predicted permease; COGs: COG0577 ABC-type antimicrobial peptide transport system permease component; InterPro IPR003838; KEGG: cyn:Cyan7425_4734 protein of unknown function DUF214; PFAM: protein of unknown function DUF214; SPTR: Putative uncharacterized protein.
 
 0.953
Chro_0143
Protein of unknown function DUF214; PFAM: Predicted permease; COGs: COG0577 ABC-type antimicrobial peptide transport system permease component; InterPro IPR003838; KEGG: gvi:gll0345 hypothetical protein; PFAM: protein of unknown function DUF214; SPTR: Gll0345 protein.
 
 0.953
Chro_0884
Protein of unknown function DUF214; PFAM: Predicted permease; COGs: COG0577 ABC-type antimicrobial peptide transport system permease component; InterPro IPR003838; KEGG: tdn:Suden_2043 hypothetical protein; PFAM: protein of unknown function DUF214; SPTR: Macrolide specific ABC-type transporter, ATP-binding protein.
 
 0.953
Chro_1088
DevC protein; PFAM: Predicted permease; TIGRFAM: DevC protein; COGs: COG0577 ABC-type antimicrobial peptide transport system permease component; InterPro IPR005891:IPR003838; KEGG: ava:Ava_3639 DevC protein; PFAM: protein of unknown function DUF214; SPTR: DevC protein; TIGRFAM: DevC protein.
 
 
 0.858
Chro_3468
DevC protein; PFAM: Predicted permease; TIGRFAM: DevC protein; COGs: COG0577 ABC-type antimicrobial peptide transport system permease component; InterPro IPR005891:IPR003838; KEGG: npu:Npun_R5575 DevC protein; PFAM: protein of unknown function DUF214; SPTR: DevC protein; TIGRFAM: DevC protein.
 
 
 0.855
Chro_2973
DevC protein; PFAM: Predicted permease; TIGRFAM: DevC protein; COGs: COG0577 ABC-type antimicrobial peptide transport system permease component; InterPro IPR003838:IPR005891; KEGG: npu:Npun_F2139 glycolipid ABC exporter inner membrane subunit; PFAM: protein of unknown function DUF214; SPTR: ABC exporter, inner membrane subunit, DevC family; TIGRFAM: DevC protein.
 
 
 0.838
Chro_2974
DevC protein; PFAM: Predicted permease; TIGRFAM: DevC protein; COGs: COG0577 ABC-type antimicrobial peptide transport system permease component; InterPro IPR003838:IPR005891; KEGG: cyc:PCC7424_0009 DevC protein; PFAM: protein of unknown function DUF214; SPTR: DevC protein; TIGRFAM: DevC protein.
 
 
 0.837
Chro_0682
PFAM: Binding-protein-dependent transport system inner membrane component; COGs: COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems permease components; InterPro IPR000515:IPR000633; KEGG: npu:Npun_R0669 binding-protein-dependent transport systems inner membrane component; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: Binding-protein-dependent transport systems inner membrane component.
 
 
  
 0.752
Your Current Organism:
Chroococcidiopsis thermalis
NCBI taxonomy Id: 251229
Other names: C. thermalis PCC 7203, Chroococcidiopsis sp. ATCC 27900, Chroococcidiopsis sp. PCC 7203, Chroococcidiopsis thermalis PCC 7203, Chroococcidiopsis thermalis str. PCC 7203
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