STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Chro_1096Protein of unknown function UPF0153; PFAM: Uncharacterised protein family (UPF0153); InterPro IPR005358; KEGG: ava:Ava_2373 hypothetical protein; PFAM: protein of unknown function UPF0153; SPTR: Putative uncharacterized protein. (117 aa)    
Predicted Functional Partners:
Chro_1502
PFAM: Protein of unknown function (DUF3529); KEGG: npu:Npun_R4030 hypothetical protein; SPTR: Putative uncharacterized protein.
  
    0.762
Chro_1386
PFAM: Protein of unknown function (DUF2488); InterPro IPR019616; KEGG: ana:all0216 hypothetical protein; PFAM: Protein of unknown function DUF2488; SPTR: Putative uncharacterized protein.
  
     0.760
Chro_3969
KEGG: ava:Ava_2412 hypothetical protein; SPTR: All5165 protein.
  
     0.760
Chro_1519
PFAM: Protein of unknown function (DUF561); InterPro IPR007570; KEGG: npu:Npun_R5436 hypothetical protein; PFAM: protein of unknown function DUF561; SPTR: Putative uncharacterized protein.
  
     0.759
Chro_1419
PFAM: Domain of unknown function (DUF1817); COGs: COG5474 conserved hypothetical protein; InterPro IPR014946; KEGG: naz:Aazo_0313 hypothetical protein; PFAM: Domain of unknown function DUF1817; SPTR: Putative uncharacterized protein.
  
    0.757
Chro_2344
PFAM: Protein of unknown function (DUF3326); KEGG: ana:alr0786 hypothetical protein; SPTR: Alr0786 protein.
  
     0.749
Chro_0198
PFAM: Iron-Sulfur binding protein C terminal; COGs: COG1142 Fe-S-cluster-containing hydrogenase components 2; InterPro IPR017900:IPR017896; KEGG: npu:Npun_F5363 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein; SPTR: 4Fe-4S ferredoxin, iron-sulfur binding domain protein.
  
     0.746
Chro_5465
PFAM: Protein of unknown function (DUF3143); KEGG: ana:asr2994 hypothetical protein; SPTR: Asr2994 protein.
  
    0.742
ndhN
Hypothetical protein; NDH-1 shuttles electrons from an unknown electron donor, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory and/or the photosynthetic chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient. Cyanobacterial NDH-1 also plays a role in inorganic carbon-concentration.
  
     0.741
Chro_3339
KEGG: npu:Npun_R5796 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.737
Your Current Organism:
Chroococcidiopsis thermalis
NCBI taxonomy Id: 251229
Other names: C. thermalis PCC 7203, Chroococcidiopsis sp. ATCC 27900, Chroococcidiopsis sp. PCC 7203, Chroococcidiopsis thermalis PCC 7203, Chroococcidiopsis thermalis str. PCC 7203
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