STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Chro_1112KEGG: cyh:Cyan8802_3866 hypothetical protein; SPTR: Putative uncharacterized protein. (200 aa)    
Predicted Functional Partners:
Chro_4571
Methyltransferase type 12; PFAM: Methyltransferase domain; InterPro IPR013217; KEGG: cyn:Cyan7425_4807 methyltransferase type 12; PFAM: Methyltransferase type 12; SPTR: Methyltransferase type 12.
  
     0.694
Chro_1113
Transcriptional regulator, MarR family; COGs: COG1846 Transcriptional regulators; InterPro IPR000835; KEGG: syn:slr8026 MarR family transcriptional regulator; PFAM: regulatory protein MarR; SMART: regulatory protein MarR; SPTR: MarR family transcriptional regulatory protein.
 
     0.564
Chro_4520
PFAM: Glycosyl transferases group 1; COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: cyn:Cyan7425_3213 glycosyl transferase group 1; PFAM: glycosyl transferase group 1; SPTR: Glycosyl transferase group 1.
  
     0.550
Chro_3081
PFAM: Glycosyl transferases group 1; COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: cyn:Cyan7425_3213 glycosyl transferase group 1; PFAM: glycosyl transferase group 1; SPTR: Glycosyl transferase group 1.
  
     0.515
Chro_1089
PFAM: Protein of unknown function (DUF2834); KEGG: bbe:BBR47_19240 hypothetical membrane protein; SPTR: Putative uncharacterized protein.
  
     0.513
Chro_5341
PFAM: Major Facilitator Superfamily; COGs: COG2814 Arabinose efflux permease; InterPro IPR011701; KEGG: cyc:PCC7424_2983 major facilitator superfamily MFS_1; PFAM: major facilitator superfamily MFS_1; SPTR: Transporter, major facilitator family.
  
     0.493
Chro_0610
Protein of unknown function DUF218; PFAM: DUF218 domain; COGs: COG1434 conserved hypothetical protein; InterPro IPR003848; KEGG: cyn:Cyan7425_2730 protein of unknown function DUF218; PFAM: protein of unknown function DUF218; SPTR: Putative uncharacterized protein.
 
     0.453
Chro_2315
Hypothetical protein; PFAM: Domain of unknown function (DUF3598); KEGG: ter:Tery_0355 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.446
Chro_1302
KEGG: ter:Tery_4360 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.428
Chro_2445
PFAM: Domain of unknown function (DUF1818); InterPro IPR014947; KEGG: ava:Ava_2013 hypothetical protein; PFAM: Domain of unknown function DUF1818; SPTR: Putative uncharacterized protein.
  
     0.425
Your Current Organism:
Chroococcidiopsis thermalis
NCBI taxonomy Id: 251229
Other names: C. thermalis PCC 7203, Chroococcidiopsis sp. ATCC 27900, Chroococcidiopsis sp. PCC 7203, Chroococcidiopsis thermalis PCC 7203, Chroococcidiopsis thermalis str. PCC 7203
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