STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Chro_1124Ethyl tert-butyl ether degradation EthD; PFAM: EthD protein; InterPro IPR009799; KEGG: cyc:PCC7424_4710 ethyl tert-butyl ether degradation EthD; PFAM: Ethyl tert-butyl ether degradation EthD; SPTR: Ethyl tert-butyl ether degradation EthD. (232 aa)    
Predicted Functional Partners:
Chro_1123
KEGG: cyc:PCC7424_4706 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.746
Chro_1122
PFAM: Nitrogen fixation protein of unknown function; KEGG: cyc:PCC7424_4707 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.681
Chro_1121
PFAM: GMC oxidoreductase; COGs: COG2303 Choline dehydrogenase and related flavoprotein; InterPro IPR000172:IPR007867:IPR012132; KEGG: cyc:PCC7424_4708 choline dehydrogenase; PFAM: glucose-methanol-choline oxidoreductase; GMC oxidoreductase; SPTR: Choline dehydrogenase.
       0.646
Chro_1119
Alpha/beta hydrolase fold protein; TIGRFAM: homoserine O-acetyltransferase; COGs: COG2021 Homoserine acetyltransferase; InterPro IPR000073:IPR008220; KEGG: cyc:PCC7424_4711 alpha/beta hydrolase fold protein; PFAM: alpha/beta hydrolase fold; SPTR: Alpha/beta hydrolase fold protein; Belongs to the AB hydrolase superfamily. MetX family.
       0.536
Chro_1120
PFAM: GMC oxidoreductase; COGs: COG2303 Choline dehydrogenase and related flavoprotein; InterPro IPR000172:IPR007867:IPR012132; KEGG: cyc:PCC7424_4709 glucose-methanol-choline oxidoreductase; PFAM: glucose-methanol-choline oxidoreductase; GMC oxidoreductase; SPTR: Glucose-methanol-choline oxidoreductase.
       0.536
Chro_1125
Thiamine pyrophosphate TPP-binding domain-containing protein; PFAM: Thiamine pyrophosphate enzyme, central domain; Thiamine pyrophosphate enzyme, N-terminal TPP binding domain; Thiamine pyrophosphate enzyme, C-terminal TPP binding domain; COGs: COG0028 Thiamine pyrophosphate-requiring protein; InterPro IPR012001:IPR012000:IPR011766:IPR000399; KEGG: npu:Npun_R2059 thiamine pyrophosphate binding domain-containing protein; PFAM: thiamine pyrophosphate TPP-binding domain-containing protein; thiamine pyrophosphate central domain-containing protein; SPTR: Thiamine pyrophosphate enzyme TPP bi [...]
       0.507
Your Current Organism:
Chroococcidiopsis thermalis
NCBI taxonomy Id: 251229
Other names: C. thermalis PCC 7203, Chroococcidiopsis sp. ATCC 27900, Chroococcidiopsis sp. PCC 7203, Chroococcidiopsis thermalis PCC 7203, Chroococcidiopsis thermalis str. PCC 7203
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