STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Chro_1190PFAM: Aldo/keto reductase family; COGs: COG0667 oxidoreductase (related to aryl-alcohol dehydrogenase); InterPro IPR020471:IPR001395; KEGG: npu:Npun_F1887 aldo/keto reductase; PFAM: aldo/keto reductase; SPTR: Aldo/keto reductase. (339 aa)    
Predicted Functional Partners:
Chro_1191
Hypothetical protein; PFAM: Calcium/calmodulin dependent protein kinase II Association; KEGG: cyh:Cyan8802_3077 hypothetical protein; SPTR: Putative uncharacterized protein.
 
     0.597
Chro_0088
PFAM: Aldo/keto reductase family; COGs: COG0667 oxidoreductase (related to aryl-alcohol dehydrogenase); InterPro IPR001395:IPR020471; KEGG: npu:Npun_F5516 aldo/keto reductase; PFAM: aldo/keto reductase; SPTR: Aldo/keto reductase.
  
     0.554
Chro_1189
Putative lipoprotein; PFAM: 2-phosphosulpholactate phosphatase; COGs: COG2045 Phosphosulfolactate phosphohydrolase; KEGG: npu:Npun_R4854 putative lipoprotein; SPTR: Putative lipoprotein; Belongs to the ComB family.
       0.527
Chro_2385
Endo-1,4-beta-xylanase; PFAM: Glycosyl hydrolase family 10; COGs: COG3693 Beta-1 4-xylanase; InterPro IPR001000; KEGG: cyn:Cyan7425_1132 endo-1,4-beta-xylanase; PFAM: glycoside hydrolase family 10; PRIAM: Endo-1,4-beta-xylanase; SMART: glycoside hydrolase family 10; SPTR: Glycosyl hydrolase, family 10.
  
     0.457
Chro_2132
Endo-1,4-beta-xylanase; PFAM: Glycosyl hydrolase family 10; COGs: COG3693 Beta-1 4-xylanase; InterPro IPR001000; KEGG: cyn:Cyan7425_1132 endo-1,4-beta-xylanase; PFAM: glycoside hydrolase family 10; PRIAM: Endo-1,4-beta-xylanase; SMART: glycoside hydrolase family 10; SPTR: Glycosyl hydrolase family 10.
  
     0.455
Chro_4899
PFAM: Macrophage migration inhibitory factor (MIF); InterPro IPR001398; KEGG: npu:Npun_F3953 macrophage migration inhibitory factor family protein; PFAM: macrophage migration inhibitory factor family protein; SPTR: Macrophage migration inhibitory factor family protein.
 
     0.414
Your Current Organism:
Chroococcidiopsis thermalis
NCBI taxonomy Id: 251229
Other names: C. thermalis PCC 7203, Chroococcidiopsis sp. ATCC 27900, Chroococcidiopsis sp. PCC 7203, Chroococcidiopsis thermalis PCC 7203, Chroococcidiopsis thermalis str. PCC 7203
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