STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Chro_1220InterPro IPR001440:IPR019734:IPR013026; KEGG: ote:Oter_1428 TPR repeat-containing protein; PFAM: Tetratricopeptide TPR_1 repeat-containing protein; SPTR: Tetratricopeptide TPR_2 repeat protein. (292 aa)    
Predicted Functional Partners:
Chro_1219
PFAM: ATPase family associated with various cellular activities (AAA); Tetratricopeptide repeat; COGs: COG0464 ATPase of the AAA+ class; InterProIPR003959:IPR019734:IPR013026:IPR003960:IPR 003593; KEGG: ote:Oter_1429 ATPase central domain-containing protein; PFAM: AAA ATPase central domain protein; PRIAM: Microtubule-severing ATPase; SMART: AAA ATPase; Tetratricopeptide repeat; SPTR: AAA ATPase central domain protein.
 
     0.765
Chro_2486
Tetratricopeptide TPR_1 repeat-containing protein; PFAM: Tetratricopeptide repeat; InterPro IPR019734:IPR013026:IPR001440; KEGG: mar:MAE_03610 TPR repeat-containing protein; PFAM: Tetratricopeptide TPR_1 repeat-containing protein; SPTR: Tetratricopeptide repeat domain protein.
 
   
 0.678
Chro_4160
Tetratricopeptide TPR_1 repeat-containing protein; PFAM: Tetratricopeptide repeat; COGs: COG0457 FOG: TPR repeat; InterPro IPR019734:IPR013026:IPR001440; KEGG: amr:AM1_G0032 TPR repeat-containing protein; PFAM: Tetratricopeptide TPR_1 repeat-containing protein; SMART: Tetratricopeptide repeat; SPTR: TPR repeat protein.
 
   
 0.648
Chro_4099
PFAM: Tetratricopeptide repeat; COGs: COG5010 Flp pilus assembly protein TadD contains TPR repeats; InterPro IPR019734:IPR013026:IPR001440; KEGG: cyn:Cyan7425_1633 tetratricopeptide TPR_2 repeat protein; PFAM: Tetratricopeptide TPR_1 repeat-containing protein; SPTR: Tetratricopeptide repeat family.
 
   
 0.643
Chro_2611
PFAM: Tetratricopeptide repeat; COGs: COG5010 Flp pilus assembly protein TadD contains TPR repeats; InterPro IPR019734:IPR013026:IPR001440; KEGG: cyh:Cyan8802_1328 peptidase S1 and S6 chymotrypsin/Hap; PFAM: Tetratricopeptide TPR_1 repeat-containing protein; SMART: Tetratricopeptide repeat; SPTR: Peptidase S1 and S6 chymotrypsin/Hap.
 
   
 0.636
Chro_0110
Tetratricopeptide TPR_1 repeat-containing protein; PFAM: Tetratricopeptide repeat; InterPro IPR001440:IPR019734:IPR013026; KEGG: ava:Ava_2004 TPR repeat-containing protein; PFAM: Tetratricopeptide TPR_1 repeat-containing protein; SPTR: Putative uncharacterized protein.
  
     0.631
Chro_1425
Tetratricopeptide TPR_1 repeat-containing protein; PFAM: Tetratricopeptide repeat; InterPro IPR001440:IPR019734:IPR013026; KEGG: cyc:PCC7424_1361 TPR repeat-containing protein; PFAM: Tetratricopeptide TPR_1 repeat-containing protein; SMART: Tetratricopeptide repeat; SPTR: Serine/threonine protein kinase containing TPR domain.
  
     0.630
Chro_1521
PFAM: Tetratricopeptide repeat; COGs: COG3063 Tfp pilus assembly protein PilF; InterPro IPR001440:IPR019734:IPR013026; KEGG: mar:MAE_58050 tetratricopeptide TPR_2; PFAM: Tetratricopeptide TPR_1 repeat-containing protein; SPTR: Similar to tr|Q8YMK7|Q8YMK7.
  
     0.605
Chro_2894
Tetratricopeptide TPR_1 repeat-containing protein; PFAM: Tetratricopeptide repeat; COGs: COG4783 Putative Zn-dependent protease contains TPR repeats; InterPro IPR001440:IPR019734:IPR013026; KEGG: amr:AM1_G0032 TPR repeat-containing protein; PFAM: Tetratricopeptide TPR_1 repeat-containing protein; SMART: Tetratricopeptide repeat; SPTR: TPR repeat-containing protein.
  
     0.592
Chro_0139
Tetratricopeptide TPR_1 repeat-containing protein; PFAM: Tetratricopeptide repeat; InterPro IPR001440:IPR019734:IPR013026; KEGG: ava:Ava_2856 TPR repeat-containing protein; PFAM: Tetratricopeptide TPR_1 repeat-containing protein; SPTR: TPR repeat.
  
     0.576
Your Current Organism:
Chroococcidiopsis thermalis
NCBI taxonomy Id: 251229
Other names: C. thermalis PCC 7203, Chroococcidiopsis sp. ATCC 27900, Chroococcidiopsis sp. PCC 7203, Chroococcidiopsis thermalis PCC 7203, Chroococcidiopsis thermalis str. PCC 7203
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