STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Chro_1226PFAM: Domain of unknown function DUF; InterPro IPR003807; KEGG: syf:Synpcc7942_2586 hypothetical protein; PFAM: protein of unknown function DUF202; SPTR: Putative uncharacterized protein. (148 aa)    
Predicted Functional Partners:
Chro_1225
NHL repeat containing protein; PFAM: AhpC/TSA family; InterPro IPR000866:IPR001258:IPR017936; KEGG: npu:Npun_R3814 redoxin domain-containing protein; PFAM: NHL repeat containing protein; alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; SPTR: Redoxin domain protein.
       0.775
Chro_2475
PFAM: Glycosyl transferase family 8; InterPro IPR002495; KEGG: syf:Synpcc7942_2294 hypothetical protein; PFAM: glycosyl transferase family 8; SPTR: Putative uncharacterized protein.
  
     0.679
Chro_1224
Permease; PFAM: Predicted permease; COGs: COG0701 permease; InterPro IPR005524; KEGG: ava:Ava_3208 permease; PFAM: permease; SPTR: Predicted permease superfamily.
       0.574
Chro_1227
TrkA-C domain protein; PFAM: Sodium:sulfate symporter transmembrane region; Citrate transporter; TrkA-C domain; COGs: COG0471 Di- and tricarboxylate transporter; InterPro IPR004680:IPR006037:IPR001898; KEGG: cyh:Cyan8802_0038 TrkA-C domain protein; PFAM: TrkA-C domain protein; Citrate transporter; SPTR: Citrate transporter superfamily.
       0.561
Chro_3559
PFAM: Chlorophyll A-B binding protein; KEGG: ava:Ava_B0155 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.552
Chro_1223
Hypothetical protein; PFAM: Domain of unknown function (DUF1980); TIGRFAM: TIGR03943 family protein; COGs: COG3689 membrane protein; KEGG: naz:Aazo_4807 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.467
Chro_5203
KEGG: naz:Aazo_0130 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.467
Chro_1285
KEGG: cyc:PCC7424_3618 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.442
Chro_2934
PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily; InterPro IPR004360:IPR018146; KEGG: ava:Ava_0971 glyoxalase/bleomycin resistance protein/dioxygenase; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; SPTR: Glyoxalase/bleomycin resistance protein/dioxygenase.
  
     0.441
Chro_1646
PFAM: Thymidylate synthase; TIGRFAM: thymidylate synthase, methanogen type; COGs: COG0207 Thymidylate synthase; InterPro IPR000398; KEGG: naz:Aazo_5011 thymidylate synthase; PFAM: thymidylate synthase; SPTR: Thymidylate synthase.
  
     0.427
Your Current Organism:
Chroococcidiopsis thermalis
NCBI taxonomy Id: 251229
Other names: C. thermalis PCC 7203, Chroococcidiopsis sp. ATCC 27900, Chroococcidiopsis sp. PCC 7203, Chroococcidiopsis thermalis PCC 7203, Chroococcidiopsis thermalis str. PCC 7203
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