Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Chro_1387 | Chro_1388 | Chro_1387 | Chro_1388 | Acid phosphatase/vanadium-dependent haloperoxidase related protein; PFAM: Divergent PAP2 family; COGs: COG1963 conserved hypothetical protein; InterPro IPR003832:IPR000326; KEGG: ava:Ava_2705 acid phosphatase/vanadium-dependent haloperoxidase related; PFAM: acid phosphatase/vanadium-dependent haloperoxidase related; phosphoesterase PA-phosphatase related; SPTR: Alr0214 protein. | Farnesyl-diphosphate synthase; PFAM: Polyprenyl synthetase; COGs: COG0142 Geranylgeranyl pyrophosphate synthase; InterPro IPR000092; KEGG: ava:Ava_2704 farnesyl-diphosphate synthase; PFAM: Polyprenyl synthetase; SPTR: Polyprenyl synthetase superfamily; Belongs to the FPP/GGPP synthase family. | 0.546 |
Chro_1387 | Chro_4655 | Chro_1387 | Chro_4655 | Acid phosphatase/vanadium-dependent haloperoxidase related protein; PFAM: Divergent PAP2 family; COGs: COG1963 conserved hypothetical protein; InterPro IPR003832:IPR000326; KEGG: ava:Ava_2705 acid phosphatase/vanadium-dependent haloperoxidase related; PFAM: acid phosphatase/vanadium-dependent haloperoxidase related; phosphoesterase PA-phosphatase related; SPTR: Alr0214 protein. | Protein of unknown function DUF1731; PFAM: NAD dependent epimerase/dehydratase family; Domain of unknown function (DUF1731); TIGRFAM: TIGR01777 family protein; COGs: COG1090 nucleoside-diphosphate sugar epimerase; InterPro IPR001509:IPR013549:IPR010099; KEGG: naz:Aazo_4780 hypothetical protein; PFAM: domain of unknown function DUF1731; NAD-dependent epimerase/dehydratase; SPTR: Putative uncharacterized protein. | 0.628 |
Chro_1387 | mrnC | Chro_1387 | Chro_4036 | Acid phosphatase/vanadium-dependent haloperoxidase related protein; PFAM: Divergent PAP2 family; COGs: COG1963 conserved hypothetical protein; InterPro IPR003832:IPR000326; KEGG: ava:Ava_2705 acid phosphatase/vanadium-dependent haloperoxidase related; PFAM: acid phosphatase/vanadium-dependent haloperoxidase related; phosphoesterase PA-phosphatase related; SPTR: Alr0214 protein. | Ribonuclease III; Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc); Rnc processes 30S rRNA into smaller rRNA precursors; Belongs to the MrnC RNase family. | 0.462 |
Chro_1388 | Chro_1387 | Chro_1388 | Chro_1387 | Farnesyl-diphosphate synthase; PFAM: Polyprenyl synthetase; COGs: COG0142 Geranylgeranyl pyrophosphate synthase; InterPro IPR000092; KEGG: ava:Ava_2704 farnesyl-diphosphate synthase; PFAM: Polyprenyl synthetase; SPTR: Polyprenyl synthetase superfamily; Belongs to the FPP/GGPP synthase family. | Acid phosphatase/vanadium-dependent haloperoxidase related protein; PFAM: Divergent PAP2 family; COGs: COG1963 conserved hypothetical protein; InterPro IPR003832:IPR000326; KEGG: ava:Ava_2705 acid phosphatase/vanadium-dependent haloperoxidase related; PFAM: acid phosphatase/vanadium-dependent haloperoxidase related; phosphoesterase PA-phosphatase related; SPTR: Alr0214 protein. | 0.546 |
Chro_4655 | Chro_1387 | Chro_4655 | Chro_1387 | Protein of unknown function DUF1731; PFAM: NAD dependent epimerase/dehydratase family; Domain of unknown function (DUF1731); TIGRFAM: TIGR01777 family protein; COGs: COG1090 nucleoside-diphosphate sugar epimerase; InterPro IPR001509:IPR013549:IPR010099; KEGG: naz:Aazo_4780 hypothetical protein; PFAM: domain of unknown function DUF1731; NAD-dependent epimerase/dehydratase; SPTR: Putative uncharacterized protein. | Acid phosphatase/vanadium-dependent haloperoxidase related protein; PFAM: Divergent PAP2 family; COGs: COG1963 conserved hypothetical protein; InterPro IPR003832:IPR000326; KEGG: ava:Ava_2705 acid phosphatase/vanadium-dependent haloperoxidase related; PFAM: acid phosphatase/vanadium-dependent haloperoxidase related; phosphoesterase PA-phosphatase related; SPTR: Alr0214 protein. | 0.628 |
mrnC | Chro_1387 | Chro_4036 | Chro_1387 | Ribonuclease III; Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc); Rnc processes 30S rRNA into smaller rRNA precursors; Belongs to the MrnC RNase family. | Acid phosphatase/vanadium-dependent haloperoxidase related protein; PFAM: Divergent PAP2 family; COGs: COG1963 conserved hypothetical protein; InterPro IPR003832:IPR000326; KEGG: ava:Ava_2705 acid phosphatase/vanadium-dependent haloperoxidase related; PFAM: acid phosphatase/vanadium-dependent haloperoxidase related; phosphoesterase PA-phosphatase related; SPTR: Alr0214 protein. | 0.462 |