STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Chro_1440PFAM: Protein of unknown function DUF88; COGs: COG1432 conserved hypothetical protein; KEGG: npu:Npun_R0091 hypothetical protein; SPTR: Putative uncharacterized protein. (213 aa)    
Predicted Functional Partners:
trmB
tRNA (guanine-N(7)-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA.
  
  
 0.551
metG
methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation; Belongs to the class-I aminoacyl-tRNA synthetase family.
       0.498
Chro_1439
PFAM: Protein of unknown function (DUF1239); InterPro IPR010664; KEGG: ana:all0231 hypothetical protein; PFAM: protein of unknown function DUF1239; SPTR: All0231 protein.
       0.476
Chro_3240
PFAM: Mo-dependent nitrogenase C-terminus; InterPro IPR009717; KEGG: ava:Ava_4669 Mo-dependent nitrogenase-like; PFAM: Mo-dependent nitrogenase family protein; SPTR: Mo-dependent nitrogenase-like.
  
     0.425
Chro_4201
PFAM: Mo-dependent nitrogenase C-terminus; InterPro IPR009717; KEGG: ana:asl5170 hypothetical protein; PFAM: Mo-dependent nitrogenase family protein; SPTR: Asl5170 protein.
  
     0.417
Chro_3262
PFAM: Mo-dependent nitrogenase C-terminus; InterPro IPR009717; KEGG: ana:asr0773 hypothetical protein; PFAM: Mo-dependent nitrogenase family protein; SPTR: Asr0773 protein.
  
     0.413
Chro_2143
PFAM: Mo-dependent nitrogenase C-terminus; InterPro IPR009717; KEGG: naz:Aazo_2363 Mo-dependent nitrogenase family protein; PFAM: Mo-dependent nitrogenase family protein; SPTR: Mo-dependent nitrogenase C-terminal domain family protein.
  
     0.412
Chro_2204
PFAM: Domain of unknown function (DUF1830); InterPro IPR014964; KEGG: syn:sll0944 hypothetical protein; PFAM: Domain of unknown function DUF1830; SPTR: Putative uncharacterized protein.
  
     0.412
Chro_5462
PFAM: Domain of unknown function (DUF1830); InterPro IPR014964; KEGG: syn:sll0944 hypothetical protein; PFAM: Domain of unknown function DUF1830; SPTR: Putative uncharacterized protein.
  
     0.411
Chro_1398
GCN5-related N-acetyltransferase; PFAM: Acetyltransferase (GNAT) family; InterPro IPR000182; KEGG: ana:alr3099 hypothetical protein; PFAM: GCN5-related N-acetyltransferase; SPTR: Alr3099 protein.
  
     0.409
Your Current Organism:
Chroococcidiopsis thermalis
NCBI taxonomy Id: 251229
Other names: C. thermalis PCC 7203, Chroococcidiopsis sp. ATCC 27900, Chroococcidiopsis sp. PCC 7203, Chroococcidiopsis thermalis PCC 7203, Chroococcidiopsis thermalis str. PCC 7203
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